| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1990 |
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| Symbol | ampC |
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| ID | 4476354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2369276 |
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| End bp | 2370493 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726572 |
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| Product | beta-lactamase |
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| Protein accession | YP_869627 |
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| Protein GI | 117920435 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00153808 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGAGT CTCTTCAGCC TGCCGTAAAA ACAGCGAGGT TTTTACGCTT ATCGAACCCA
TCACCCTTTT TAGGTTTAGT GCTGCTTACG GCAGTGCCAT TAGTGGCCAA TGCTGCACCA
CAGGTTCAAA CAAAAGCCAT GCAATCCCTT GTCGATTCCG CGATCAATCC GTTAATGAAG
GAATATGGGA TCCCAGGGGC TATTGTTGGG ATCAGTATGA ATGGTCAACA GTATTTCTTC
CCCTATGGTG TGAGCTCAAA AACCACAGAG CATCATGTCA GCAAGAATAC CCTGTTCGAG
ATTGGTTCTA TCAGCAAAAC CTTTACCGCG ACACTCGCAA ACTATGCTCA AGTCGAAGGT
AAGCTCACTT TGACTGATAA AGTAAGCCAA TACCTGCCCG AATTAACGGG CAGTGCCTTT
GATCAGATAA ATCTTATCAA TCTCGCGACC CATACCGCGG GCGACTTGCC CATGCAAGTG
CCAGATAAAG TGACGAACAA TGCAGAATTG ATGCGTTATT TTAAAGAATG GCAACCCGCC
TATGCCGCGG GAACACACCG AAATTATGCT AATCCCAGCA TTGGATTACT CGGCTTAATT
GCGGCAAAAC AGTTAGGGCA AAGCTTTCCA AACGCAATGG AGCAAACCCT ATTTCCACAA
CTGGGTATGA CTCACAGCTA TCTTCAAGTG CCAAGCAACA AGCTGGCCGA TTACGCCCAA
GGATATAACA AGCAAGATCA GCCCGTGCGC CTGAATCCCG GTGTGTTAGC CGAGGAGGCT
TACGGGATTA AAACTTCGGC CGTGGATTTG CTGCGTTTTG TTGAAACCAA TATGCAGCAA
CATCCTGTCC CTTCCGTACT ACAGCAGGCC ATAGATGCAA CTCACGTTGG CTACTTTGAT
GTCGGTATGA TGACCCAAGA GATGATTTGG GAGCATTATC CCTATCCTAT AGCCCTCGAT
AAGCTGCTTG CTGGACATAC CCAAGAAGTG GTGTTTGGCA GTGTGCCAGT GAAAGCAATC
GTGCCGCCGC AAGCACCACA GCCTGATTTA TGGATAAATA AGACAGGTTC AACTGGTGGC
TTTGCCGCCT ATGTGGCTTA TATTCCCGCG AAGAAACTGG GCATGGTGTT ACTGAGCAAT
AAAAATTATC CCGTTCCGCC TCGGGTGACT GTTGGCTACC AGATATTAAC GGGCTTAACA
GCACTGCCAG CGAAATGA
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| Protein sequence | MPESLQPAVK TARFLRLSNP SPFLGLVLLT AVPLVANAAP QVQTKAMQSL VDSAINPLMK
EYGIPGAIVG ISMNGQQYFF PYGVSSKTTE HHVSKNTLFE IGSISKTFTA TLANYAQVEG
KLTLTDKVSQ YLPELTGSAF DQINLINLAT HTAGDLPMQV PDKVTNNAEL MRYFKEWQPA
YAAGTHRNYA NPSIGLLGLI AAKQLGQSFP NAMEQTLFPQ LGMTHSYLQV PSNKLADYAQ
GYNKQDQPVR LNPGVLAEEA YGIKTSAVDL LRFVETNMQQ HPVPSVLQQA IDATHVGYFD
VGMMTQEMIW EHYPYPIALD KLLAGHTQEV VFGSVPVKAI VPPQAPQPDL WINKTGSTGG
FAAYVAYIPA KKLGMVLLSN KNYPVPPRVT VGYQILTGLT ALPAK
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