| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1981 |
|---|
| Symbol | |
|---|
| ID | 4476345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2359529 |
|---|
| End bp | 2360224 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639726563 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_869618 |
|---|
| Protein GI | 117920426 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000191461 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000644794 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA AACCTATCCT CGTAGCGCTT GATTACGATA ATAAAAACCA CGCCTTACAA
CTGATAGATC AACTCGATCC CAACATGTGC CGCCTCAAAG TGGGCAAAGA AATGTTTACC
CTGTTTGGCC CACAATTGGT TAAAGACATT CACGACCGTG GTTTCGATCT TTTCCTCGAC
CTAAAGTTTC ACGATATTCC CAATACGGTC GCCAAAGCAG TTGCGGCTGC GGCAGAACTT
GGCGTGTGGA TGACAAACGT GCATGCCAGC GGTGGCTTGG CCATGATGGA AGCGGCGAAA
AAAGCGTTGC TGCCCTATGG CAAGGATGCA CCTCTGCTAA TCGCAGTAAC GGTACTTACT
TCAATGAGTG ATGAAGATTT AAAACTCATC GGCATTGATG TGCCAGCTTT TGAACATGTG
CAACGTCTCG CGAAACTCAC CAAGCAGGCG GGCCTTGATG GTGTGGTCTG TTCGGCGCAA
GAGGCAAATG TACTAAAATC ACTCTTAGGT CAAGATTTTA AACTTATCAC CCCGGGGATC
CGTCCACTGG GCAGCGACGT GGGTGACCAA CACCGGGTGA TGACGCCACC GGAGGCGCTT
GCAGCCGGTT CTGATTATTT AGTGATTGGT CGACCAATCA CTAAGGCCGC CGATCCTCTG
GCGGCGCTGC AGGCGATTCA TCAATCTCTC GCTTGA
|
|---|
| Protein sequence | MTTKPILVAL DYDNKNHALQ LIDQLDPNMC RLKVGKEMFT LFGPQLVKDI HDRGFDLFLD
LKFHDIPNTV AKAVAAAAEL GVWMTNVHAS GGLAMMEAAK KALLPYGKDA PLLIAVTVLT
SMSDEDLKLI GIDVPAFEHV QRLAKLTKQA GLDGVVCSAQ EANVLKSLLG QDFKLITPGI
RPLGSDVGDQ HRVMTPPEAL AAGSDYLVIG RPITKAADPL AALQAIHQSL A
|
|---|
| |