Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1976 |
Symbol | cmk |
ID | 4476340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2355102 |
End bp | 2355794 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639726558 |
Product | cytidylate kinase |
Protein accession | YP_869613 |
Protein GI | 117920421 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000166074 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000164919 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGAAC GGGCTCCTGT AGTCACAATC GACGGCCCAA GTGGTGCTGG TAAAGGGACA ATTAGCCAAT TATTGGCTAA GCATCTCGGA TGGCAACTGC TTGATAGTGG TGCTATTTAC CGAGTGCTTG CGTTAGCTGC AATTCACCAC GATGTAGAAC TGGAAAATGA AGAATCCATC ACACTCCTTG CTGCGCACCT TGATGTGAAA TTTTTAACCG GCAATGAGAA AGACCCAGTT CAAGTGATCT TAGAAGGTGA AGACGTCACT ACTGCGATAC GTACTCAAGA ATGCTCAAAT GCGGCCTCTA AAGTGGCGGC ATTTCCCCGT GTGCGGGAAG CCTTATTACG TCGTCAACGT GCCTTTAGAA CGGCACCCGG ATTAATCGCC GATGGCCGCG ACATGGGCAC GGTTGTTTTC CCAACAGCAT CGGCTAAATT ATATTTAACT GCTTCTGCAG AGGAGCGGGC TCAAAGACGC TATAATCAGT TGCAGGACAA GGGCTTCGAT GTTAATATCG AGCGCCTTTT AGCTGAAATT ATCGAGCGTG ACGACCGCGA TATGAATCGT CCAGTGGCCC CTTTGGTCCC TGCCGAGGAT GCGCTCGTTA TCGATACTAG CGATAAAGGT ATTGATGAAG TACTTGAGCT TGCGCTCAAC TACATCAACC AAAAATTATC CCACAATAAC TAA
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Protein sequence | MSERAPVVTI DGPSGAGKGT ISQLLAKHLG WQLLDSGAIY RVLALAAIHH DVELENEESI TLLAAHLDVK FLTGNEKDPV QVILEGEDVT TAIRTQECSN AASKVAAFPR VREALLRRQR AFRTAPGLIA DGRDMGTVVF PTASAKLYLT ASAEERAQRR YNQLQDKGFD VNIERLLAEI IERDDRDMNR PVAPLVPAED ALVIDTSDKG IDEVLELALN YINQKLSHNN
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