Gene Shewana3_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1973 
Symbol 
ID4476337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2350697 
End bp2351788 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content48% 
IMG OID639726555 
Productphosphoserine aminotransferase 
Protein accessionYP_869610 
Protein GI117920418 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000290161 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000366479 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGCGA TTTATAATTT CTGTGCAGGT CCTGCGATGT TACCCGCAGC GGTAATGAAA 
AAAGCACAAC AGGAATTACT CGATTGGAAT GGGCTAGGTG TCTCCGTGAT GGAAGTCAGC
CACAGAGGTA AGGAGTTTAT CGCGCTGACC AAGCAAGCTG AGGCGGATTT ACGCGAGCTG
ATGCACATTC CACAGAACTA TCATGTGTTG TTTATGCACG GCGGTGGTCG CGGTCAGTTC
TCTGCCGTTG TGAATAATTT TTTAGGCAAC CAAGGCAGAG CCCTGTATTT AGTCAGTGGT
CAATGGTCTT CTGCAGCATT AGCCGAAGCA CAAAAGCTGG CGGGTGACAC TCAAATTGAT
AGCCTTAACA TTGTTGAAAA ACATAATGGA CTCAATGCAG TAGTGCTGCC TGAACTGCAT
AAGATTGATG CCGATTACCG TTATGTGCAC TACTGCCCAA ATGAGACAGT TGATGGTATC
GAAATTTTTG ATGAGTTAGA CAGTCCATGG CCGATTGTCG CCGACTTATC ATCTACCATT
ATGTCTCGCG AAATCGATGT CAGTCGTTAC GGTTTAATCT ATGCTGGCGC ACAGAAGAAC
ATTGGTCCTT CGGGCTTATC TATTGTGATC GTGCGTGATG ATATGTTGAA GCTGCCGAGT
TTAACCCAAT CATCCATCAT GGATTACCGT TTAGCCGTTG AGCATGACTC CATGTTCAAC
ACGCCGCCAA CCTTTGCTTG GTACTTAGCG GCTGAAGTAT TTGCTTGGCT CAAATCCTTA
GGTGGTGTGG CTAGTATCGC GAAAATCAAT CAGCAAAAAG CGCAAATGCT GTATGCCTGT
ATCGATGCCA ATCCTTTCTA TAAAAATGGT GTCGTCGCGG CAAACCGCTC ACAAATGAAC
GTGACTTTCC AACTGGCGGA TGAATCCCTT GATGGCGCCT TCTTAAAAGA GGCCGAAGCG
GCGGGCCTAG TGGCCTTAAA AGGTCATCGA ATCGTTGGTG GCATGCGTGC CAGCCTTTAC
AATGCGATGC CACTTGAAGG TGTCGCCGCG CTGGTGAGCT TTATGAACGA ATTTGCGGCA
AAGCATAGCT AA
 
Protein sequence
MSAIYNFCAG PAMLPAAVMK KAQQELLDWN GLGVSVMEVS HRGKEFIALT KQAEADLREL 
MHIPQNYHVL FMHGGGRGQF SAVVNNFLGN QGRALYLVSG QWSSAALAEA QKLAGDTQID
SLNIVEKHNG LNAVVLPELH KIDADYRYVH YCPNETVDGI EIFDELDSPW PIVADLSSTI
MSREIDVSRY GLIYAGAQKN IGPSGLSIVI VRDDMLKLPS LTQSSIMDYR LAVEHDSMFN
TPPTFAWYLA AEVFAWLKSL GGVASIAKIN QQKAQMLYAC IDANPFYKNG VVAANRSQMN
VTFQLADESL DGAFLKEAEA AGLVALKGHR IVGGMRASLY NAMPLEGVAA LVSFMNEFAA
KHS