| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1964 |
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| Symbol | |
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| ID | 4479418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2336874 |
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| End bp | 2338718 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726546 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_869601 |
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| Protein GI | 117920409 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000013501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00412535 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCTA ACCCATCGTT TTTCAAGAGA ATATGTTTAT TTATATGGAA CACCCTCAAC
GGGATCCGTA AATTCATACT CAACCTGATT TTTTTTGGCT TCCTGGCCAT CATCCTCATT
ACTATTGGCA GCAGTGAGGA TATTCAGGTC GAAGAGAACT CAGCATTGGT GCTCAATCTG
GCAGGTTCAA TTGTCGATCA AAAACAACAG GTCGACCCAA TTGAAGCCGC ACTTAAACAA
GGCAATAACG GCAGCAGCGA TGGTGAAATC CTGCTGTCCG ATATTATCTA TGTGATTGAT
AACGCGACGC ACGATAACAG GATCAGCACC ATAGTCTTAG ACTTAGCCGA GCTGAAACGC
GCAGGGATCA GCAAATTACA ATCCATTGGC GATGCCCTGA ATCGTTTTAA AGAAAGCGGC
AAAAAAGTGG TGGCAATTGG AAACTATTAC GAGCAAAACC AATACTTTCT TGCCAGCTTT
GCCGATACCA TTTACCTCAA TCCCCAAGGC AGTGTTTCTC TCGATGGCTT GAGTATGTAT
AACCAATACT TCAAATCCGC CCTCGAGAAG CTCAAGATAA AGGCACACAT TTTCCGCGTC
GGCACCTTTA AATCCGCGGT AGAACCTTAC ATGCGTGACG ATATGTCGGA TGCGGCCAGA
GAGGCAAGCA GCGCCCTACT CGCCGATGTT TGGCAGAGTT ATACTCAAAC GGTTGCAGAA
AACCGCCAAA TTGATGCCAA TACCTTAGTG CTGGACTCGG CAAGCTACCT CGCGCAACTG
GATAAGGCCG AAGGCGACTC CGCCACTATG GCCATCAATA TGAAATGGGT CGATACCCTA
GCGACCGATG AAGAGTTCCG TAAAGTCATG CTCGATAGCG TGGGTAAAGA GAAGTCGGGT
GACAGCTTTA AGCAAGTCAG CTTTTACGAC TACTTAACCT TAGTGACGCC TTTGCCAAGC
TTTGTTGAGC AAGACAGTGT CGGCATTATC GTTGCCAGCG GCACCATTTT AAATGGCAGC
CAACCCGCCG GCCAAATCGG TGGCGATAGC ACTGCAGAGC TGTTACGTAA GGCGCGATTT
GATAAACATA TCAAAGCGCT GGTACTTAGA GTCGACAGCC CTGGCGGCAG CGCCTTTGCC
TCAGAGCAGA TCCGCCAAGA ATTACTCGCC CTCAAAGCGG CGGGTAAACC TGTGGTGGTG
AGTATGGGCA GCCTTGCGGC GTCTGGCGGC TACTGGATTT CGGCTAGCGC CGATTATATC
TTCGCAACCC CAACTACACT GACGGGCTCT ATCGGGATCT TCGGGATGAT CACCACCTTC
GAAGATTCAC TCGCTAGCTT AGGTATTCAT ACCGATGGTG TATCGACCTC TGAATGGGCG
GGATTGTCTG TAACTCGTAC CCTCTCGCCA CAAATCGAAT CGGTTATCCA GCGTCATATC
GAGCGTGGTT ACTTAGACTT TATCTCACTG GTCGCTAAGG AACGTAAAAT GACCTTGGAA
CAAGTGGATA GCATCGCCCA AGGCCGTGTG TGGAGTGGTA AAAAAGCCCT AGAGTTAGGT
TTAGTGGACG AGCTTGGCGA TATCGACCAA GCCGTTGCCA AAGCCGCTAA ATTGGCAGAT
TTAAGCCTAT TCGATACCCG CGTAATTGAA CAAGAGCTCA CGCCTGAACA GCGTTTTGTG
CAGCAAATGT TTGCCTCTGT TTCGGCCTAC TTGCCCGCGT CACTCAGCCA TTCAACACTG
CTTGAGCAAA TGTTGGCGCA ATGGACGGGC AGCTTAAAGA CCATCGCGGC CTTTAACGAT
CCTAACCATG TGTATGTGTA TTGTGACAGC TGTGCGATCA ACTAA
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| Protein sequence | MSANPSFFKR ICLFIWNTLN GIRKFILNLI FFGFLAIILI TIGSSEDIQV EENSALVLNL
AGSIVDQKQQ VDPIEAALKQ GNNGSSDGEI LLSDIIYVID NATHDNRIST IVLDLAELKR
AGISKLQSIG DALNRFKESG KKVVAIGNYY EQNQYFLASF ADTIYLNPQG SVSLDGLSMY
NQYFKSALEK LKIKAHIFRV GTFKSAVEPY MRDDMSDAAR EASSALLADV WQSYTQTVAE
NRQIDANTLV LDSASYLAQL DKAEGDSATM AINMKWVDTL ATDEEFRKVM LDSVGKEKSG
DSFKQVSFYD YLTLVTPLPS FVEQDSVGII VASGTILNGS QPAGQIGGDS TAELLRKARF
DKHIKALVLR VDSPGGSAFA SEQIRQELLA LKAAGKPVVV SMGSLAASGG YWISASADYI
FATPTTLTGS IGIFGMITTF EDSLASLGIH TDGVSTSEWA GLSVTRTLSP QIESVIQRHI
ERGYLDFISL VAKERKMTLE QVDSIAQGRV WSGKKALELG LVDELGDIDQ AVAKAAKLAD
LSLFDTRVIE QELTPEQRFV QQMFASVSAY LPASLSHSTL LEQMLAQWTG SLKTIAAFND
PNHVYVYCDS CAIN
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