Gene Shewana3_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1963 
SymbolansA 
ID4479417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2335749 
End bp2336762 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content49% 
IMG OID639726545 
Productcytoplasmic asparaginase I 
Protein accessionYP_869600 
Protein GI117920408 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00519] L-asparaginases, type I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.145247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0808598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAC GCTCCATTTA CGTCGCCTAT ACGGGCGGCA CCATAGGCAT GCAAAAAACC 
GCGAATGGCT TTGCACCGGT GGCAGGCTTT TTGACCCAAT GTGTCCAATC CATGCCCGAG
TTTTACCATG ATGAAATGCC TGAGTTTGTG ATCCATGAGT ACTGCCCGCT CATCGACTCA
TCAAACATGG CACCAACCGA CTGGCAAATG ATCGCCGATG ATATCAAGGC CAATTACGAC
AAGTACGATG GCTTTGTGAT CCTCCACGGC ACAGATACCA TGGCCTATAC TGCATCGGCC
TTATCCTTTA TGCTTCAAGG TCTGTCAAAG CCTGTTATCG TCACCGGCTC TCAAATTCCA
TTGGCACAGC TGAGATCAGA CGGTCAAACC AACCTACTTA ACTCTTTATA TATCGCCGCC
AATTATCCGG TGGCTGAAGT GTGTTTATTC TTTAATAACA AACTGTTCCG CGGTAATCGT
TCCACCAAAG CCCATGCCGA TGGCTTCGAT GCCTTTGCCT CGCCTAACTT CCCCTTACTG
CTTGAGGCAG GGATTAAAAT TAATCTGCGT GCAGGTAAAA TTGCCACGCC AAGTGATAAG
CCGTTAGAAG TGGCGAATAT CAGCCCGCAG CCTGTCGGAG TGGTGACTCT CTATCCTGGT
ATTTCGACAC AAATTTTTGA GAACATTCTA CAGCAACCTG TAAAGGCGCT GATTTTACTA
ACCTTTGGCG TGGGCAATGC ACCACAGGAT GCGGCATTAC TCGATACCCT AAAGCAAGCG
GATGAGCGTG GAATTGTGTT AGTGAACCTA ACTCAGTGTT TCCAAGGCAA AGTGAATATG
GGCGGTTACG CTACGGGCAA TGCCCTCGCC AAAGCGGGGG TGATCAGTGG TGCAGACATG
ACCATTGAAG CCGCACTGGC TAAGTTGCAT TATCTGCTAT CGAAAAACTT AAAGCCGAGC
GAAATTAAAA CTGCCATGCT GCAAAACTTG GTTGGTGAGC TCAGCCCCGA CTAA
 
Protein sequence
MTKRSIYVAY TGGTIGMQKT ANGFAPVAGF LTQCVQSMPE FYHDEMPEFV IHEYCPLIDS 
SNMAPTDWQM IADDIKANYD KYDGFVILHG TDTMAYTASA LSFMLQGLSK PVIVTGSQIP
LAQLRSDGQT NLLNSLYIAA NYPVAEVCLF FNNKLFRGNR STKAHADGFD AFASPNFPLL
LEAGIKINLR AGKIATPSDK PLEVANISPQ PVGVVTLYPG ISTQIFENIL QQPVKALILL
TFGVGNAPQD AALLDTLKQA DERGIVLVNL TQCFQGKVNM GGYATGNALA KAGVISGADM
TIEAALAKLH YLLSKNLKPS EIKTAMLQNL VGELSPD