| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1959 |
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| Symbol | |
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| ID | 4479756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2333086 |
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| End bp | 2333766 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639726541 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_869596 |
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| Protein GI | 117920404 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.400986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.283843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA TACTGTTAGT CGATGATGAT CCATTATTCA GAGTTTGGTT AACTGAAGCG
CTTAAAGCAC AGGGACATGA AGTTGAATGT GCCGTAAACG GCGTTGAAGG GCTCAAACGT
ATTCGCAGCT TTAGGCCTGA TATTATTATG CTCGATCTGG TGATGCCGCA AATGGATGGT
TTCTCACTAC TAGAGGCGAG GGACTGTATA ACGCCTATCA TGATGTTATC TGCCCGTGAT
AATGAGGCTG ACAGGATCCG AAGCTACGAG CTTGGTGCGG ATGATTTCTT AACGAAACCC
TTTAGCATTA GAGAGTTATT GGTGCGTTTG CATGCCTTAG AGCGTCGATT AATCCCGCGC
GCCACAGAGC CAATGGCAAT CGAGCAGGCG ACAATCCAGC CGGTCAAATT CGATGAGGCT
GCTTATAGGA TCACTATTGG TAAAAATGCC GTGGAGCTCA CCCAAACCGA GTTTAGGTTG
TTTAAGTATC TGTTCGAGCG TAAGGGGCAA GTGATCACTA AGCAAGAGCT GCAAAAATCC
GTATTGCAGA AGGACTTAGG CCGTTTTGAT CGTAACTTGG ATATGCATAT TAGTAATACA
AGGCGCAAAC TGGCGAATAC CCGTTTACCG CGGACATTAA TCAATACGGT CCGTGGTCAA
GGGTACAGTT TTTCCGCTTG A
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| Protein sequence | MSKILLVDDD PLFRVWLTEA LKAQGHEVEC AVNGVEGLKR IRSFRPDIIM LDLVMPQMDG
FSLLEARDCI TPIMMLSARD NEADRIRSYE LGADDFLTKP FSIRELLVRL HALERRLIPR
ATEPMAIEQA TIQPVKFDEA AYRITIGKNA VELTQTEFRL FKYLFERKGQ VITKQELQKS
VLQKDLGRFD RNLDMHISNT RRKLANTRLP RTLINTVRGQ GYSFSA
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