Gene Shewana3_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1949 
Symbol 
ID4479746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2318340 
End bp2319161 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content51% 
IMG OID639726531 
Producthypothetical protein 
Protein accessionYP_869586 
Protein GI117920394 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAGC AGTTGATCGC TATCGCCGTT GCCAGCAGCT TAATGGGATG CGCAGCGACA 
GAACCGACCG CCCACGCCCC CAAACCACTC GATACTGATA CCTTTAATAC CCGTCTTAAT
CAGCAGCAAG ATCAATTAGT CGCTGCGATT AATCAGCAAT GCCAGCCTGC GGATTTAACC
TCGCTTGCGA CACTCAACAG CCAAGTCGAG CAGCTCAGTC TGCAAATCAA TCACTTAAAT
CAAGCGGCGA AAAACCTCAC CGCACAAAAG CAAGCCGCGG TGGTGACGTC TGCGCCGAGC
CAATGCCCCA AATCCGCCCT TGGGGATAAG TTTTTACTCG GTGAAATCGA AAATGTGTTT
ATCGATGAAC TCAATGCCAG TTTTGCCACC CGCATTGATA CGGGCGCAGA GTCCTCCTCC
ATCGATGCCC GTAATATCAC GCTGTTTGAG CGCGATGGTG CCCAATGGGT ACGCTTTGAT
GTGTATACTC AAGGGGAAAA ACAGCCCGCG ACGAATTTCG AATCTAAGGT CGTGCGTTTT
GTGCGCATTA AGCAGGACGC CAATGAAAAG GACGATCGCC GCCCCGTGAT CCACGCGCAC
CTTAAGATTG GCCAATATTC CGCAGAGACA GATCTTAACC TCACCGACCG TAGTCACCTC
GACTATCCCT TATTGCTCGG CCGTAAATTT ATCAAAGATA TCGCCGTTGT CGATGTCGGC
CAGCGCTATG TGCACGGTAA AGCCAAACCG CCCAAACCCA AACAACCCGA TCCTGAACAA
CCTAAAGCAG AGTCAGCTAT CGTCTCCAGC GGCAAAAAAT AA
 
Protein sequence
MLKQLIAIAV ASSLMGCAAT EPTAHAPKPL DTDTFNTRLN QQQDQLVAAI NQQCQPADLT 
SLATLNSQVE QLSLQINHLN QAAKNLTAQK QAAVVTSAPS QCPKSALGDK FLLGEIENVF
IDELNASFAT RIDTGAESSS IDARNITLFE RDGAQWVRFD VYTQGEKQPA TNFESKVVRF
VRIKQDANEK DDRRPVIHAH LKIGQYSAET DLNLTDRSHL DYPLLLGRKF IKDIAVVDVG
QRYVHGKAKP PKPKQPDPEQ PKAESAIVSS GKK