Gene Shewana3_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1948 
Symbol 
ID4479745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2316620 
End bp2318128 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content50% 
IMG OID639726530 
Producthypothetical protein 
Protein accessionYP_869585 
Protein GI117920393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCAC GTAAACCTTT TTACATTTTG GTGGCATTAC TTTTTATTAT CGGTTTAAGC 
GCCAGCATCT ATCGCGGCGT TAAGCATCAA GTGCCTTTTC TACCCGGTGA GCAAGTACAA
AGCTGGGCGG TAGACGCCAA AATCAGTTTC GATGGCACTG GCGATGCGGC CGAAGTGTCC
TTCTCCTTAC CACAGGATCC CGCCTATGAA GTCTTGGTCG AAAACGCCAG CTCCCCAGGC
TTTGGGTTAT CGGTGAGTGA TGATAAGGAC GCGCGCCGTG CAATTTGGTC TATTCGTGAA
GCCTATGGCA GCCAAGATCT CTATTATAAA GTGACCCTAG TGCCAACGGG TGTGACCCAA
ATCCACAGCG ACAATATCCC CAGTCAACCA GAGCCTTACC TCTGGCCCGC GACCGAGAAG
ACCGCTGCAG AGCAAGTGAT TAACGAAACT TGGACGCGCA GCGCATCGAA TTTATCCTTC
GCCCAGCAAT TGATGAATGC AATCACTGCA ACTAAGCGCA GCCAGAATAT GGAGCTATTG
CTGTCGAGCC AAACCGCGAC GCAAGTGTTT TTGCATATGC TGCAAACTAA GGGCATTCCC
GCCCGTGAAG TCAGCGGGCT CTACCTTGAA GATCAACGCC GCCGTCAATC CCTCTCGCCC
TTTGTGGAAG TGTTCCATAA CGGCGAGTGG GTCTTATTCG ATTTGGTTAA AGGCAAGCAA
GGTCGTCCAG AGAACTTACT GCTGTGGGAA CGCTCGGGCC ATTCCGTGCT CGATGTGATG
GGCGGAGTGA ACTCGCAGGT ACATTTCTCG ATGTTGCAAG ACACCCGCTC GGCATTGGCG
ACCTCCATCG ATATGATGAT GAATAACAAT GCCTTGGATT TCTCACTCTA CCAATTACCG
CTGGAGGAGC AGAGTCTATT CAAGGGCATT TTATTGATCC CTATTGGGGT ACTGATGGTG
GTGTTTTTAC GGGTGATTAT TGGGGTCAAG ACCTCGGGCA CCTTTATGCC AGTCCTTATC
GCCCTCGCCT TTATTCAGAC CAGTTTAGTC ACGGGTTTAG TCGGCTTCTT GCTGATCGTG
GCCTGCGGCC TAATGATCCG CTCCTATTTG TCCCAATTAA ATCTGTTGCT GATCTCGCGA
ATATCGGCGG TCATCATCGT CGTGATCGGC ATTATCGGCG TCTTTACCTT GCTGTCTTAT
AAATTCGGTT TAAGCGAAGG ACTGACGATT ACCTTCTTCC CGATGATTAT TTTGGCGTGG
ACCATCGAAC GTATGTCTAT CCTCTGGGAG GAAGAAGGCC CGAAAGAAGT GATAGTGCAA
GGCGGTGGCA GTCTAATGGT CGCCACACTC GCCTACTTAG CTATGAGCGC CAGTTGGGTA
CAACACTGGG TATTTAACTT CCTTGGGATC CACTTAGTGA TTTTGGCCCT AGTGCTATTA
ATGGGCCAAT ACACAGGTTA TCGCCTACTG GAACTCAAAC GCTTTAAACC ACTCGCGGGG
GATGCCTAA
 
Protein sequence
MHSRKPFYIL VALLFIIGLS ASIYRGVKHQ VPFLPGEQVQ SWAVDAKISF DGTGDAAEVS 
FSLPQDPAYE VLVENASSPG FGLSVSDDKD ARRAIWSIRE AYGSQDLYYK VTLVPTGVTQ
IHSDNIPSQP EPYLWPATEK TAAEQVINET WTRSASNLSF AQQLMNAITA TKRSQNMELL
LSSQTATQVF LHMLQTKGIP AREVSGLYLE DQRRRQSLSP FVEVFHNGEW VLFDLVKGKQ
GRPENLLLWE RSGHSVLDVM GGVNSQVHFS MLQDTRSALA TSIDMMMNNN ALDFSLYQLP
LEEQSLFKGI LLIPIGVLMV VFLRVIIGVK TSGTFMPVLI ALAFIQTSLV TGLVGFLLIV
ACGLMIRSYL SQLNLLLISR ISAVIIVVIG IIGVFTLLSY KFGLSEGLTI TFFPMIILAW
TIERMSILWE EEGPKEVIVQ GGGSLMVATL AYLAMSASWV QHWVFNFLGI HLVILALVLL
MGQYTGYRLL ELKRFKPLAG DA