| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1937 |
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| Symbol | |
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| ID | 4479734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2304011 |
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| End bp | 2305693 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726519 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_869574 |
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| Protein GI | 117920382 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTG CTAAACATGT TAGCCACTTG GCGCCTAAAC CTATCGTCTG GACCATTGCG
GGTTCAGACA GCGGTGGCGG CGCGGGGATC CAAGCCGACT TAGCCACCAT CAAGGATTTG
GGCGGTCATG GATGCAGCGT GATCACCACG TTAACGGCCC AAAGTTCGGT GGCGGTGGAT
TTAGTTGAGC CTGTGAGTGA GGCAATGCTA CTCACACAGC TCTCGACCCT GTTAGCCGAT
CTACCGCCTC AGGCGATTAA AATTGGCTTA CTCGCGAATC AGCAGCAACT GCATTTAGTT
GCCGATTGGT TGGCTGGCTT TAAAACCCAG TTTCCACTCG TCCCTGTTAT TCTCGACCCT
GTAATGGTTG CAAGCTGTGG GGATGAACTT GGGGATAAGA GCACGGCGAG CCAGCCACTG
GATTTTACGC CCTTTAAGGG CTTGATTAGC CTGATAACGC CGAATGTGCA GGAGTTGGCA
AAGCTTACTG TCACAACTGA CAAACAAGTG TCACCAATAC ACACAAAAGC AGCGTTCGCT
GCTGCGGCAA TGCAACTCTC TGAACAATTA GACTGCAGCG TATTAGCCAA GGGCGGCGAT
GTTGATTTTG CGGCTCAGGC AAGCGTAGGC ATTAATACAA GGGATAGCTT AAGCGGTCAC
AAAAGCGATA TCACAAGTCA TCGCAGTGCC ACAGATAATC AGCGTATGGC GGAAGATTTG
TTGATTTGTC ATCAGGTTAC AGGTTGCACA CCGCTCGACG CTAATGGCTG CTTTTGGCTC
AGCAGTGCGC GGATTAACAC GCGCCATAAC CACGGCAGTG GCTGTACTCT GTCTTCGGCC
ATCGCCTCGG TGTTAGCCTT TGGCTTTGTA TTGCAGGATG CCGTTGTGGT AGCAAAAGCC
TATGTCAATC AAGGCTTAAC TTATGCAGGG GGGATTGGCC AAGGCCCAGG GCCACTCGCG
CGTACCGCTT GGCCGCACAA TTTGACGGCG TATCCTCATA TTACTGCTTA TTCTGAAAAC
AGCTTGAGTG AATCCAGTGA TGTGCAATGC GGCGCGTTTA AGCGCCTTGA GCCTGACTTA
GGAATCTATC CTGTCGTCGA TAACCTACTG TTACTCGAAC AGTTATTAGC GGCAGGCGTG
AAGACGGTAC AGCTCAGGAT AAAGTCTAAT GCGCTAAAGT CGGACGAACT TGAGGCTCAA
ATCCAAACCG CGATTGCCTT AGGTAAACAC TATGAAGCGC AGCTTTTTAT CAATGATCAT
TGGCAGTTAG CGATAAAACA TGGCGCATTT GGGGTGCATC TTGGCCAAGA AGATCTGGCA
GTGACGGATC TTAATGCCAT TCATGCAGCA GGATTGGCGC TAGGCATCTC GAGCCACGGT
TATTTCGAGT TGCTGCGTGC CCATCAACAT GCGCCATCTT ACATCGCCCT CGGGCATATT
TTCCCAACGA CCACCAAGCA AATGCCATCG GCGCCGCAGG GATTATTTAA ACTCACTCAT
TATGTTGAGC TGTTAAATAC ACACTATCCC TTAGTGGCAA TTGGTGGCAT AGGACCTTCG
AATCTTTTGC TAGTCAAAGC GACTGGGGTG AGCAATATTG CCGTGGTGCG GGCGATTACC
GAGGCTAATG ATCCAGTAAT GGCCCTTGCC GAATTGACGC GAGCCTGGGA GTCAAGCCTA
TGA
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| Protein sequence | MTSAKHVSHL APKPIVWTIA GSDSGGGAGI QADLATIKDL GGHGCSVITT LTAQSSVAVD
LVEPVSEAML LTQLSTLLAD LPPQAIKIGL LANQQQLHLV ADWLAGFKTQ FPLVPVILDP
VMVASCGDEL GDKSTASQPL DFTPFKGLIS LITPNVQELA KLTVTTDKQV SPIHTKAAFA
AAAMQLSEQL DCSVLAKGGD VDFAAQASVG INTRDSLSGH KSDITSHRSA TDNQRMAEDL
LICHQVTGCT PLDANGCFWL SSARINTRHN HGSGCTLSSA IASVLAFGFV LQDAVVVAKA
YVNQGLTYAG GIGQGPGPLA RTAWPHNLTA YPHITAYSEN SLSESSDVQC GAFKRLEPDL
GIYPVVDNLL LLEQLLAAGV KTVQLRIKSN ALKSDELEAQ IQTAIALGKH YEAQLFINDH
WQLAIKHGAF GVHLGQEDLA VTDLNAIHAA GLALGISSHG YFELLRAHQH APSYIALGHI
FPTTTKQMPS APQGLFKLTH YVELLNTHYP LVAIGGIGPS NLLLVKATGV SNIAVVRAIT
EANDPVMALA ELTRAWESSL
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