Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1936 |
Symbol | |
ID | 4479733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2301846 |
End bp | 2304008 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639726518 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_869573 |
Protein GI | 117920381 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGTT TAGAATCGTC CTCAGAATCG ATTGCCGTGA ACACCCTAGG GCAAACGAGC CGCCGTGCGG CGCGCGCCCA GGCCCAAGCC TTTATCGATA CCCTTAAACC ATTACAACAC CCTAATTCGC AAAAGTTGTA TTTGCAGGGG AGTCGTGAGG ATCTCCGTGT AGGGATGCGG CAAATTCTGC AAACCGATAC GCGGATTGGC GGCACTGCAG CAGAGCCTAC AGTTGAGAAA AATCCTCCCA TTCCTGTGTA CGACTGCGCG GGGCCTTATT CCGATCCAGC TGCGCAAATT AACGTGCGCC AAGGCTTAGC CAAACTCAGA TTACCTTGGA TTATCGAGCG CCAAGATACC GAAGTGCTTG ATTGTGCGAC CTCAGATTTC ACCCAGCAGC GCCTGAAGGA TGATGGGCTT GATCATCTGC GTTTCGAAGC CGGTTCAAGT GCAATTGTTC GTCCCCGCCG TGCCTTACCG GGTAAACGCG TGAGCCAATT ACACTATGCC CGCCAAGGGA TCATTACCCC CGAAATGGAG TATGTGGCGA TTCGGGAAAA TATGGCGCTC GCCGAGGTGC AGGATGAAAT CTTAAACCGC CGCGGCCAAG GTGAATCCTT TGGTACCGTG ATCGGTAAAT CGATTACCCC TGAATTTGTC CGCGACGAAA TTGCCCGTGG GCGCGCCATT ATTCCGTTAA ATATCAATCA CCCTGAAGCT GAGCCCATGA TTATTGGCCG TAACTTTCTG GTGAAAGTGA ATGCCAATAT CGGCAACTCG GCGGTCACGT CTTCCATTGA GGAGGAAGTG GAAAAGTTAG TCTGGTCAAC CCGCTGGGGC GCGGACACTG TGATGGACTT GTCCACGGGG CGATATATCC ATGAAACCCG TGAATGGATC ATCCGAAACT CGCCAGTGCC GATTGGCACA GTGCCGATTT ATCAAGCTTT GGAAAAAGTA AACGGTGTTG CCGAGCACCT GACCTGGGAA GTATTTCGCG ATACCTTGAT TGAGCAAGCG GAGCAGGGCG TCGATTACTT TACCATCCAT GCGGGCGTGT TATTGCGCTA TGTGCCCATG ACTGCCAAAC GGGTGACTGG GATTGTGTCC CGCGGCGGGT CGATTATGGC CAAATGGTGT TTGAGTCACC ATCAAGAAAA CTTCCTCTAT ACCCATTTCC GCGAGATTTG CGAACTGTGT GTTGCCTACG ATGTATCGCT GTCATTAGGT GACGGTATGC GTCCAGGCTC CATTGCCGAT GCCAATGATG AGGCGCAGTT TGCCGAGCTT GAAACCTTAG GCGAGCTGGT CAAAATCGCC TGGGAATACG ATGTGCAGAC CATTATCGAA GGGCCAGGGC ATATCCCGAT GCAGCTTATC AAGGAGAATA TGGATAAGCA GCTTATCCAC TGCGCCGAGG CGCCATTTTA TACCTTAGGT CCACAAATTA CCGATATTGC ACCGGGTTAC GATCATTTCA CCTCGGGGAT AGGTGCGGCG ATGATTGCAT GGTATGGCTG CGCCATGCTC TGCTATGTGA CGCCGAAAGA ACACTTAGGT TTACCCAATA AGCAGGACGT CAAACAAGGG CTGATTGCCT ACAAGATTGC CGCCCATGCG GCCGATATTG CTAAAGGTCA CCCGGGCGCG CAGATCCGCG ACAATGCGTT ATCTAAGGCG CGCTTTGAAT TCCGTTGGGA AGACCAATAT AACTTAGGGC TTGACCCTGA TACCGCGCGT GCCTATCACG ATGAATCCCT GCCACAGGAA TCGGCCAAGG TTGCGCATTT TTGCTCTATG TGTGGCCCTA AGTTTTGCTC GATGAAGATC ACCCAAGATG TACGTGACTA TGCGGCAAGT TTAGCGGCGG GTGCGTTAGC AGGGGCTTCG TCAAGCCAGA ATAATGAAAC GACTGAAGCG CTTGCATCGA TAAACTCTGC TCCACAAGGG CAAGCTAGCA AAGAAGCAAT CCAGCAGATC AGAGTCAAAA CCCAAGATGA ATTAGCGGCG GCCATGGCGC AAAAATCGGC CGAGTTTGCG GCCTCGGGCG CCAAACTGTA TCTGCCGCTA GGTGATGCTA ATGCAGCCAA TACTGCCAAC GAATCGGCAA AGCATCAGGA TGGGACAGAG CTCCAACCCA CAGTACAGGT AGCGGAGGTT TGA
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Protein sequence | MSSLESSSES IAVNTLGQTS RRAARAQAQA FIDTLKPLQH PNSQKLYLQG SREDLRVGMR QILQTDTRIG GTAAEPTVEK NPPIPVYDCA GPYSDPAAQI NVRQGLAKLR LPWIIERQDT EVLDCATSDF TQQRLKDDGL DHLRFEAGSS AIVRPRRALP GKRVSQLHYA RQGIITPEME YVAIRENMAL AEVQDEILNR RGQGESFGTV IGKSITPEFV RDEIARGRAI IPLNINHPEA EPMIIGRNFL VKVNANIGNS AVTSSIEEEV EKLVWSTRWG ADTVMDLSTG RYIHETREWI IRNSPVPIGT VPIYQALEKV NGVAEHLTWE VFRDTLIEQA EQGVDYFTIH AGVLLRYVPM TAKRVTGIVS RGGSIMAKWC LSHHQENFLY THFREICELC VAYDVSLSLG DGMRPGSIAD ANDEAQFAEL ETLGELVKIA WEYDVQTIIE GPGHIPMQLI KENMDKQLIH CAEAPFYTLG PQITDIAPGY DHFTSGIGAA MIAWYGCAML CYVTPKEHLG LPNKQDVKQG LIAYKIAAHA ADIAKGHPGA QIRDNALSKA RFEFRWEDQY NLGLDPDTAR AYHDESLPQE SAKVAHFCSM CGPKFCSMKI TQDVRDYAAS LAAGALAGAS SSQNNETTEA LASINSAPQG QASKEAIQQI RVKTQDELAA AMAQKSAEFA ASGAKLYLPL GDANAANTAN ESAKHQDGTE LQPTVQVAEV
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