| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1934 |
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| Symbol | |
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| ID | 4479731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2299251 |
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| End bp | 2299934 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639726516 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_869571 |
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| Protein GI | 117920379 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.680237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCC AGAGTTTGAT AGAGCCGCAA ATGAGTCATG AAAAACCATT GAATATCAGT
GGCTATAGCC TTAGTGAGGA GATAGCCAAT AGCATCAGCC ATGGCCTTGG AGTGATCGCG
GGTGTGGTCG GCTTAGTGTT TATGATCCTC AAGGGCGCCG ACCACCTCAC CAGCATTCAG
CTCACAGGTG TTATTATTTA TGGTGCAAGC CTTATCCTGT TGTTTTTAAG TTCTACCCTG
TATCACAGCG TAACGCATGT AGGCTGGAAA CATAAACTCA AGATTGCCGA TCACTGTGCC
ATCTACTGCT TAATTGCAGG CACCTATACC CCTCTGATGT TAATCAGCCT GCAAGGACAA
CTTTCCACCA TTATCCTGAC GGCGATTTGG TCCTTGGCTA TTGGTGGGAT TTTATTTAAG
ACCTTGTTTA TTCATCGTTT TAAAAAAATG AGCCTAGTGC TCTATTTGGT GATGGGTTGG
CTGTGTGTGA CTGTGATGGG CGATTTGACG GCGGCGATGT CGCCGCTAGG ATTTAAGCTT
CTGCTATTAG GCGGGTTGTT TTACACCTTA GGGGTGGTCT TCTATGTCGG TAAACGCATC
CCATACAATC ACGCGATTTG GCATTTATTT GTATTGGCGG GCGCGATGAG CCACTTCTTT
TGTATTTATT TAACAGTGAT CTAA
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| Protein sequence | MPSQSLIEPQ MSHEKPLNIS GYSLSEEIAN SISHGLGVIA GVVGLVFMIL KGADHLTSIQ
LTGVIIYGAS LILLFLSSTL YHSVTHVGWK HKLKIADHCA IYCLIAGTYT PLMLISLQGQ
LSTIILTAIW SLAIGGILFK TLFIHRFKKM SLVLYLVMGW LCVTVMGDLT AAMSPLGFKL
LLLGGLFYTL GVVFYVGKRI PYNHAIWHLF VLAGAMSHFF CIYLTVI
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