Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1933 |
Symbol | |
ID | 4479730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2298690 |
End bp | 2299220 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726515 |
Product | NUDIX hydrolase |
Protein accession | YP_869570 |
Protein GI | 117920378 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.39617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTAT TGAAGTCTAC CCAAGCCGCC AATCTCAATC TTAAACAGGC GAAGATTTTT TATCGCCAAG CCGCCCGTGC CATAGTGCTG TCGGGGGAAG ATATTTTGCT GCTCTATACC CAAAAATATC GCGATTACGG TTTGCCTGGT GGTGGGGTAG ATAAGGGCGA GAGCCTTGAA GTTGGACTTA TCCGCGAATT GCAGGAAGAA ACCGGCGCCA TTACCGCCAA AGTGTTAGCG CCCTTTGGTC GTTATGAGGA ATATCGTTCC TGGTTTCGTG AGGGAGCAAA TGTTGTACAC ATGGACTCTT ACTGTTACCT GTGCGAAATC GATACGAGCC TTGGCGAGCG CGGCCTAGGT GAGCCAAGAC TCGAAGCCCA TGAGATTAAA AATGGCATGC GCCCTGAATG GATCAATATC CACCAAGCGA TTGCCCATAA TGAAGAGATC CAACGAACGT TCGCCAATAA AGGGCAATCC ATCGACAGGG AAACCTTTCT GCTCAAACGA ATCGTCGCAG AGTTGCTGTA G
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Protein sequence | MRLLKSTQAA NLNLKQAKIF YRQAARAIVL SGEDILLLYT QKYRDYGLPG GGVDKGESLE VGLIRELQEE TGAITAKVLA PFGRYEEYRS WFREGANVVH MDSYCYLCEI DTSLGERGLG EPRLEAHEIK NGMRPEWINI HQAIAHNEEI QRTFANKGQS IDRETFLLKR IVAELL
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