Gene Shewana3_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1933 
Symbol 
ID4479730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2298690 
End bp2299220 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content49% 
IMG OID639726515 
ProductNUDIX hydrolase 
Protein accessionYP_869570 
Protein GI117920378 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.39617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTAT TGAAGTCTAC CCAAGCCGCC AATCTCAATC TTAAACAGGC GAAGATTTTT 
TATCGCCAAG CCGCCCGTGC CATAGTGCTG TCGGGGGAAG ATATTTTGCT GCTCTATACC
CAAAAATATC GCGATTACGG TTTGCCTGGT GGTGGGGTAG ATAAGGGCGA GAGCCTTGAA
GTTGGACTTA TCCGCGAATT GCAGGAAGAA ACCGGCGCCA TTACCGCCAA AGTGTTAGCG
CCCTTTGGTC GTTATGAGGA ATATCGTTCC TGGTTTCGTG AGGGAGCAAA TGTTGTACAC
ATGGACTCTT ACTGTTACCT GTGCGAAATC GATACGAGCC TTGGCGAGCG CGGCCTAGGT
GAGCCAAGAC TCGAAGCCCA TGAGATTAAA AATGGCATGC GCCCTGAATG GATCAATATC
CACCAAGCGA TTGCCCATAA TGAAGAGATC CAACGAACGT TCGCCAATAA AGGGCAATCC
ATCGACAGGG AAACCTTTCT GCTCAAACGA ATCGTCGCAG AGTTGCTGTA G
 
Protein sequence
MRLLKSTQAA NLNLKQAKIF YRQAARAIVL SGEDILLLYT QKYRDYGLPG GGVDKGESLE 
VGLIRELQEE TGAITAKVLA PFGRYEEYRS WFREGANVVH MDSYCYLCEI DTSLGERGLG
EPRLEAHEIK NGMRPEWINI HQAIAHNEEI QRTFANKGQS IDRETFLLKR IVAELL