Gene Shewana3_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1922 
Symbol 
ID4478230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2284710 
End bp2286098 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content51% 
IMG OID639726504 
Productsodium/sulphate symporter 
Protein accessionYP_869559 
Protein GI117920367 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGT TAAGTATTAA ACAATGGTTG GTCTTTAGCG CCATGCTCGT CGCCGTTTTG 
TTGGCCATGT TTCCACTACA GCAGCACCCT GCACTTTTTT CCTACAGCGC ATCGGTCGTA
CTCATCACCC TGTTATTTTG GAGCACTGGC TTTATTCCGC CCTTTATGGC GGGACTGATC
TTTTTTGCCT TGGCCACCAT TTTTAAACTG ATCGACCCCA GTGCGTTGTT CTCGGGATTC
GGTTCGGCGG CGGTGTGGTT AATTATCTCC GGCTTTGTGA TTGGTAGCGC TATTTCAGAG
TCGGGATTGA GTCGCCGCCT TGCCGCCGTT ATCGCCCCCG CGTTAACCAT GAGTTATCCA
CGCATGATTG CGGGACTCGT CATCAGCGCG ATGCTACTGG GATTTGTGAT GCCATCCTCC
GTGGGGCGCG CGGTAGTGAT GCTGCCCATC GGCATGGCCT TGGCCGATCA GCTCGGGTTT
AGTCGTGGCA GCAATGGCCG GATAGGCATA GCAACTGCCC TTGCGCTCGC CTGTAATATG
CCCAGCCTTG CGGTACTGCC CGCCAATATT CCCAACATGA TTTTGGCCGG TGCGAGCGAA
AATCTGTTTA ACGTGCATTT TGGCTATGCT GAATATCTGT TTCTGCACTT TCCGATTTTA
GGTCTGCTCA AATCAGCCAT TATCGTGGCA CTCGTGGTGT ATTTGTTTCC GGCCAAGATT
AATAAAAACC AGATTGCGGC AGCGACGGAT ATCGAAGCGT ATGATGTGGT TAAACAAGTT
AAACTCGCTT TGTTACTCAT CATCACTCTG CTGTTTTGGA TAACAGACTC ATGGCATGGA
ATTAATCCGG CATGGGTGGG GCTAACGACC GCCATCATTC TCTTGCTGCC GAAATGGGGC
ATTATTGAGC CAAAGCGCTT TAATCAATCG GTTGATTTTT CAACGGTTAT CTTTGTTGCC
GCCGCGCTAG GATTAGGCGC CCTAGTCAAT CAATCTGGGC TAGGTAGCGC GCTCGGCCAA
GCATTCAGCC AATACTTACC CTTGTCGCAA GGCGCCTCTT TCCTCAACTT TATATCCTTA
TCACTGATAT CGACCTTAAC TGGATTAGTG GCAACCGTGC CTGGTGTGCC TACGGTACTC
ACCCCCATGG CTGCCGACTT AGCGAATGCG ACAGGGTTTT CTCTCCCCGC GGTATTGATG
ACGCAAGTGA TCGGCTTTTC GACGGTGATT TTCCCCTATC AAGCGCCGCC GCTGATTTTG
GCAATGCAAC TGTCGCAGGA GTCCCTCGCC CATCTACTGA AAGTCACCTT ACCCTTAGCG
CTGATCACCT TATTGGTGCT GATGCCGCTC GACTACCTCT GGTGGCATTT ACTGGGATGG
ATAAGCTAG
 
Protein sequence
MGKLSIKQWL VFSAMLVAVL LAMFPLQQHP ALFSYSASVV LITLLFWSTG FIPPFMAGLI 
FFALATIFKL IDPSALFSGF GSAAVWLIIS GFVIGSAISE SGLSRRLAAV IAPALTMSYP
RMIAGLVISA MLLGFVMPSS VGRAVVMLPI GMALADQLGF SRGSNGRIGI ATALALACNM
PSLAVLPANI PNMILAGASE NLFNVHFGYA EYLFLHFPIL GLLKSAIIVA LVVYLFPAKI
NKNQIAAATD IEAYDVVKQV KLALLLIITL LFWITDSWHG INPAWVGLTT AIILLLPKWG
IIEPKRFNQS VDFSTVIFVA AALGLGALVN QSGLGSALGQ AFSQYLPLSQ GASFLNFISL
SLISTLTGLV ATVPGVPTVL TPMAADLANA TGFSLPAVLM TQVIGFSTVI FPYQAPPLIL
AMQLSQESLA HLLKVTLPLA LITLLVLMPL DYLWWHLLGW IS