| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1921 |
|---|
| Symbol | |
|---|
| ID | 4478229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2283895 |
|---|
| End bp | 2284494 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639726503 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_869558 |
|---|
| Protein GI | 117920366 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3009] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTT TACTGTTATT GATTGCATTT TTAATGGCGG GCTGTAGCAG TCAGCCCACT
CCTCAAACCT ATTTTATCGC CCTGCAACAT ACGGCAGTTG CAGGTACAAC GGATACCAGC
CGTGGCGTTA TCCGTTCTGG CGAGCCGTGC GCATTAAGGG TTAATCGGGT GAACTTGGCT
GACTATCTCA ATACCCATGG TTTGGTTTAT CAAACCTCAG CACGGGAGTT GGTCGTAGCA
AAGCAGCATT TATGGGCAGG TTCTTTGGCC GAGCAAATCC AATTTAGGTT AAATAATTTG
CTAAGCCAGT CATGCAGCGC ATCTGCTAGA TGGGCCTTAG CAACCGATAG CCCTGCTAAA
TCCGTCCAAC TCGACCTCAT TGTGACTGAA TTTTATGGCA GCTATACAGG TGAGGCTGTT
GTGGGCGGGC AGTGGCGCCT GATGGATAAT ACGCAGCAAG TGCTGCGTGA GCAGCCATTC
CAATATCGTG TCTCATTGCC TGAAGAAGGT TATGCGGCTC TCGTCAGCAG CCTAGATAAT
GGGCTGGTGC AGCTTGCTGA AGGTATCCGC TTAATGGCGT CGCCGCATAC TGCTCAGTGA
|
|---|
| Protein sequence | MRILLLLIAF LMAGCSSQPT PQTYFIALQH TAVAGTTDTS RGVIRSGEPC ALRVNRVNLA
DYLNTHGLVY QTSARELVVA KQHLWAGSLA EQIQFRLNNL LSQSCSASAR WALATDSPAK
SVQLDLIVTE FYGSYTGEAV VGGQWRLMDN TQQVLREQPF QYRVSLPEEG YAALVSSLDN
GLVQLAEGIR LMASPHTAQ
|
|---|
| |