| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1917 |
|---|
| Symbol | |
|---|
| ID | 4478225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2276236 |
|---|
| End bp | 2279343 |
|---|
| Gene Length | 3108 bp |
|---|
| Protein Length | 1035 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639726499 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_869554 |
|---|
| Protein GI | 117920362 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.261287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTT CAACCTTTGC GCTAAGGCAA AAAACCTTCG TTATTTTCTT CACTGTGCTG
TCGATCATCG CGGGGATTTA TTCCTACTTC GACTTAGGCA AGCTGGAAGA TCCGTCTTTT
ACCGTAAAAA GTGCGGTGAT TGTGACCCTC TATCCCGGCG CGAATGCCAA GGAAGTCGAG
CAGTTGGTTA CCGATAAAAT TGAAACTAAG CTCGAGGAGA TGGAATCCCT CTGGAAGTTA
CGTTCACTCT CCCGTCCGGG GAGTTCGATG ATCTTTGTCG ATCTGAAGGA AAAAGTGAAC
TCTGAGGCCT TGCCACAACA GTGGGATTTG ATGCGCCGTA AAGTGGAAGA CGTCAAATTA
GAGCTGCCCG TACAGGCGCA AATCAGCATA GTTCAAGATG AATTCTCTGA AGTCTACGGC
ATGTTGTTCG CTGTCTATGG CGACAACATG GAAATGGCGG AATTGAAGGA TCATGCGCGG
GAATTACAGC GCCGCATTAA AGCCGTCGAT GGGGTGAAAA AAGTTCAGCT GCACGGCATT
AACGAGCAGG TGGTGAATAT CCGTATCTCC GAGGAGCGTT TGGCGGAAGC TAACCTCACC
ATGCTGCAAT TGATTGAGCA GTTGCATAGC CAGAATATGC CGATTGTGGC GGGGGATTTT
GATCTTGGCA TCGAAAACCT ACGCGTGGAG CAGGGCGATA CCTTTAAGAG TATTGAGGAT
ATTCGCAATC TCAGCATTCA GACTGGTTTA AATGGACTGC AATCGGCGGT GATCCGCTTA
GGGGATATTG CCGATGTGAC TATGGCGTAT CAAGATCCTG CCTCAACACT CAGCCGCTAT
AACGGCCAAC AGGCGATTAC GTTGGCCGTC AGCCCTGTGA ATGGCATAAA CGTGGTCAGC
ATCGGCGATA CCTTAAAGGC GGTGCTGGCT GATTATCAAG CCAAGTTACC AGATGGTGCG
GGCATTGGGG TGATTGCCTA TCAACCGGAA GAAGTTCAAA AGTCGGTTAA CAACTTTATC
GTTAACTTGA TTGAGAGTGT GGTGATTGTG GTTGTTGTGC TGCTGATCTT TATGGGATGG
CGCAGCGCCG CGATTGTGGG GGTGAGTCTG CTGCTCACTA TTTTGTTCAC CTTGATTTAT
ATGAATCTAA CCAGCGTCGA TTTGCAGCGG GTGTCCCTTG GCTCCTTTGT ATTAGCGCTA
GGGATGCTGG TGGATAATGC CATTGTGATC GTCGATCTGT TCCAAGCCAA GATCAAGCAG
GGCATAGAGC GTACTCAGGC GGTTATCGAC AGCATTAAAG AAATGGCCAT GCCGCTCCTC
GGTGCGACAG TGATTGCCGC TATGGGCACG GCACCCGTGC TGTTATCACA AACCGACTCG
GCGGAGTTTT CACTCTCGAT TGTGCAGGTG TTGTGTAGCT CGCTGCTGCT CTCATGGATT
ATTGCCATGG TCGTCACCCC GCTGATGTGT TGGTATTTCT TAGGAAAAAC CAGCGAAGTC
GATGCTGAAA ATGCGAAACC GCCTTCTCGC TACACGCTGA TGTATCAACA AGCGGTGGAG
TGGGTTGTAG AAAACCCGAA GAAGACCATT CTCTTTACCG TGCCTTTACT GCTGGGCACC
TTACTGGTCG CGCCGTTATT AAAAGTGAAT TTTATGCCGT CGTCCGATCG TGCCATCGTG
TTCCTCGATT ATTGGCTGCC CAATGGTGGG CGTATCGAGC AGACCTCGAC GGATATGCGT
AAGGTCGAGC ATTGGTTACT GGCGCAACCT GAGGTGGCAA GTATCTCCAG TTATGTGGGC
GAGAGTGCAC CGCGGTTCTC GGTCACGGTC GAGCCTGAGC CTTTGGATGC GAGCTATGGC
CAGATCCTCA TCAATATGCG CAGTTTCGAT GATATCGACA CCTTAGTGCA GCGTGGCGAT
GCCTGGTTAG CCAAGGAATT TCCCTATGCA GAGCCGAGAT TTAGGGAGTT AAAGCTGGCG
ACTAAGGATA AATATTCGAT TGAAGCGCGT TTTATCGGGC AGGATCCCAA GGTGCTGCAT
AGCTTAGCCA ACCAGGCTAA GGACATCATG CGCCAACATC CGAACTTAAA ATACGTTCGC
GATGACTGGC GACAAGAGAG CAAAGTCATG ACGCCACAGG TGGATATGCA TGCCGCCCGT
TTAGCTGGCG TGACACGCAC CGATATTGCC AATGCCATCA ATCGTGTCAC CGAAGGCACC
CATGTTGGCA CTATGCGACA CGGTGACGAT TTGATCCCGA TTAAATTGCG TAGCGCCGAT
GCCTCTTTGG AACATTTTGA ACATATTCCC GTGCGTTCAT TACTCGGCAC ACACAGCGTA
CCTATGGGGC AAGTGGTTGA GAGTATTGAG ATTAAAGGTG AAGAAAGCAT GGTGTGGCGT
CGCAACCGCT TACCTGCGAT CACCGCTCAA GCGGGCGTGA GTGGCGATAC CGCATCGAAC
GTACGCCAGA GCATTGCGGC GGATATCGAG GCGATTGCGC TGCCCGATGG TTATCGGATG
GAATGGGGCG GTGAATACTA CGATGAGCAG CGCTCGATTG ACGACTTGAT GCAGCAGAAT
CCTAAGGCAA CCCTGTTGAT GGTGATTATT TTGGTGGCGA TGTTTAACGC CTTCCGTCAA
CCGCTGATCA TTATGATTAC TCTGCCATTG GCGGCGATAG GCATTGTCTG GAGTTTACTG
TTATTGGACA AACCCTTCGG CTTTATGGCG ATCGTCGGCA TGATCTGTCT GTCGGGAATG
ATCATCAAAA ATGGCATTGT GCTAATGGAT CAGATTGAAC TCGAACGCCG CAATGGCCGC
AGAATTGCCG AGGCGATTAA GGCGGCGACG CTCAACCGCA CTATGGCAAT TTCGATGGCG
GCCCTGACGA CGGCGCTGGG GATGATCCCC TTGTTAACCG ACAGACTGTT TGACCAAATG
GCCGCGACCA TTATTGGTGG TTTGACCGCT GCGTCTGTGC TGTCTTTGTT TGTGATGCCT
GCCTTGTATC GACTCTTTTA TCGTCGAGAA GAGCGTGAGG AAGATGCATT ACTCGATGCA
CAAACGGACA ACACTCCATC GGTTATTAGC AGTGCCAAAG GGGCCTAA
|
|---|
| Protein sequence | MSLSTFALRQ KTFVIFFTVL SIIAGIYSYF DLGKLEDPSF TVKSAVIVTL YPGANAKEVE
QLVTDKIETK LEEMESLWKL RSLSRPGSSM IFVDLKEKVN SEALPQQWDL MRRKVEDVKL
ELPVQAQISI VQDEFSEVYG MLFAVYGDNM EMAELKDHAR ELQRRIKAVD GVKKVQLHGI
NEQVVNIRIS EERLAEANLT MLQLIEQLHS QNMPIVAGDF DLGIENLRVE QGDTFKSIED
IRNLSIQTGL NGLQSAVIRL GDIADVTMAY QDPASTLSRY NGQQAITLAV SPVNGINVVS
IGDTLKAVLA DYQAKLPDGA GIGVIAYQPE EVQKSVNNFI VNLIESVVIV VVVLLIFMGW
RSAAIVGVSL LLTILFTLIY MNLTSVDLQR VSLGSFVLAL GMLVDNAIVI VDLFQAKIKQ
GIERTQAVID SIKEMAMPLL GATVIAAMGT APVLLSQTDS AEFSLSIVQV LCSSLLLSWI
IAMVVTPLMC WYFLGKTSEV DAENAKPPSR YTLMYQQAVE WVVENPKKTI LFTVPLLLGT
LLVAPLLKVN FMPSSDRAIV FLDYWLPNGG RIEQTSTDMR KVEHWLLAQP EVASISSYVG
ESAPRFSVTV EPEPLDASYG QILINMRSFD DIDTLVQRGD AWLAKEFPYA EPRFRELKLA
TKDKYSIEAR FIGQDPKVLH SLANQAKDIM RQHPNLKYVR DDWRQESKVM TPQVDMHAAR
LAGVTRTDIA NAINRVTEGT HVGTMRHGDD LIPIKLRSAD ASLEHFEHIP VRSLLGTHSV
PMGQVVESIE IKGEESMVWR RNRLPAITAQ AGVSGDTASN VRQSIAADIE AIALPDGYRM
EWGGEYYDEQ RSIDDLMQQN PKATLLMVII LVAMFNAFRQ PLIIMITLPL AAIGIVWSLL
LLDKPFGFMA IVGMICLSGM IIKNGIVLMD QIELERRNGR RIAEAIKAAT LNRTMAISMA
ALTTALGMIP LLTDRLFDQM AATIIGGLTA ASVLSLFVMP ALYRLFYRRE EREEDALLDA
QTDNTPSVIS SAKGA
|
|---|
| |