Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1910 |
Symbol | |
ID | 4478218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2267022 |
End bp | 2267852 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639726492 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_869547 |
Protein GI | 117920355 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.1426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000239826 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATTTTT CTTCACACAG AAAACAACTC AACATCGCCG GTAGCCAACT CAGTTACCTC GATATAGGTT CAGGCCCAGC GCTGTTATTT GGTCACAGTT ACCTCTGGGA TAGCGCCATG TGGGCGCCGC AAATTGCCAG CTTAAGTCAA TACTACCGCT GCATCGTGCC TGAGCTCTGG GGACACGGCC AATCGGGCGC AGTCCCAGAA AGCTGCAACA GCCTCTTAGA CATCAGCGAG CATATGCTGA CCCTGATGGA TAGCCTCAAT ATCGAGCAAT TTGCGGTTAT CGGTTTATCC GTGGGTGCAA TGTGGGGCGC CGAGCTCGTG CTTAAAGCCC CCGCGCGCGT CAATGCACTG GTGATGCTCG ACAGTTTTAT TGGGTTTGAG CCAGAGATCA CCCGCGCTAA ATATTATGGC ATGCTGGACA TGATCCAAGC CGCCGGCAGC ATACCTGCGC CGCTTATCAG CGCCATTTCG CCACTGTTTT TCGCCGATAA TGCCAAAGCG AATAATCCCG AATTAGTGCA GCGTTTTGAG GCCTACTTGG CCGCGCAAAC GCCAGAGACC ATCCCGAGCA TAGTTAAGCT TGGCCGAATG ATTTTTGGCC GCCGCGATAC GATGGAATTT GCCGAGCAAT TAACTCTGCC CTGTTTAGTC ATGGTCGGAG TCGCAGACAA GGCCCGCAGC GTGCTCGAAA GTTATCTGAT GAGCGATGCC ATCGACGGTA GTCAATTAGT GCATATTCCT AATGCTGGGC ATATTTCCAG CCTAGAGCAA GCTGACTTCG TCACTGAGCA TTTAACTCGG TTTTTAGTGA AGGTATTGTA A
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Protein sequence | MDFSSHRKQL NIAGSQLSYL DIGSGPALLF GHSYLWDSAM WAPQIASLSQ YYRCIVPELW GHGQSGAVPE SCNSLLDISE HMLTLMDSLN IEQFAVIGLS VGAMWGAELV LKAPARVNAL VMLDSFIGFE PEITRAKYYG MLDMIQAAGS IPAPLISAIS PLFFADNAKA NNPELVQRFE AYLAAQTPET IPSIVKLGRM IFGRRDTMEF AEQLTLPCLV MVGVADKARS VLESYLMSDA IDGSQLVHIP NAGHISSLEQ ADFVTEHLTR FLVKVL
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