Gene Shewana3_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1910 
Symbol 
ID4478218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2267022 
End bp2267852 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content52% 
IMG OID639726492 
Productalpha/beta hydrolase fold 
Protein accessionYP_869547 
Protein GI117920355 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.1426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000239826 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTT CTTCACACAG AAAACAACTC AACATCGCCG GTAGCCAACT CAGTTACCTC 
GATATAGGTT CAGGCCCAGC GCTGTTATTT GGTCACAGTT ACCTCTGGGA TAGCGCCATG
TGGGCGCCGC AAATTGCCAG CTTAAGTCAA TACTACCGCT GCATCGTGCC TGAGCTCTGG
GGACACGGCC AATCGGGCGC AGTCCCAGAA AGCTGCAACA GCCTCTTAGA CATCAGCGAG
CATATGCTGA CCCTGATGGA TAGCCTCAAT ATCGAGCAAT TTGCGGTTAT CGGTTTATCC
GTGGGTGCAA TGTGGGGCGC CGAGCTCGTG CTTAAAGCCC CCGCGCGCGT CAATGCACTG
GTGATGCTCG ACAGTTTTAT TGGGTTTGAG CCAGAGATCA CCCGCGCTAA ATATTATGGC
ATGCTGGACA TGATCCAAGC CGCCGGCAGC ATACCTGCGC CGCTTATCAG CGCCATTTCG
CCACTGTTTT TCGCCGATAA TGCCAAAGCG AATAATCCCG AATTAGTGCA GCGTTTTGAG
GCCTACTTGG CCGCGCAAAC GCCAGAGACC ATCCCGAGCA TAGTTAAGCT TGGCCGAATG
ATTTTTGGCC GCCGCGATAC GATGGAATTT GCCGAGCAAT TAACTCTGCC CTGTTTAGTC
ATGGTCGGAG TCGCAGACAA GGCCCGCAGC GTGCTCGAAA GTTATCTGAT GAGCGATGCC
ATCGACGGTA GTCAATTAGT GCATATTCCT AATGCTGGGC ATATTTCCAG CCTAGAGCAA
GCTGACTTCG TCACTGAGCA TTTAACTCGG TTTTTAGTGA AGGTATTGTA A
 
Protein sequence
MDFSSHRKQL NIAGSQLSYL DIGSGPALLF GHSYLWDSAM WAPQIASLSQ YYRCIVPELW 
GHGQSGAVPE SCNSLLDISE HMLTLMDSLN IEQFAVIGLS VGAMWGAELV LKAPARVNAL
VMLDSFIGFE PEITRAKYYG MLDMIQAAGS IPAPLISAIS PLFFADNAKA NNPELVQRFE
AYLAAQTPET IPSIVKLGRM IFGRRDTMEF AEQLTLPCLV MVGVADKARS VLESYLMSDA
IDGSQLVHIP NAGHISSLEQ ADFVTEHLTR FLVKVL