Gene Shewana3_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1907 
Symbol 
ID4478215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2263547 
End bp2264617 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content47% 
IMG OID639726489 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_869544 
Protein GI117920352 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000681421 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000909138 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGTTTTA AAAATTTTAA AGTAGTTGAA AAGATGATCT TCGGTCGTGG CTCCTTCGCA 
CAATTAGACG AAGTATTAGC TGCTCAGCGT AAGGCCGACG ATGACTTCGT GGTATTTTTA
GTCGATGACG TTCACCAAGG CAAACCACTC GAAGCACGCA TCCCAGTGAA AGCCCAAGAC
TTACTGATTT GGGTTAACGT AGATGATGAG CCAAGCACAG TGCAAATCGA CACCCTGACC
GAGCAAGTTC AAGCCTTCAA CGGCAAACAA CCGGTTAGCG TCGTCGGTTT AGGTGGCGGT
TCAACCATGG ACGTTGCAAA AGCAGTATCA CTGATGCTGA CCAACCCAGG CGGCTCTGCC
ATGTACCAAG GTTGGGATTT AATCAAAAAC CCAGCGGTTC ACCACATTGG TATTCCAACG
ATTTCAGGTA CGGGTGCTGA AGCGTCACGC ACCGCAGTAT TGTGTGGTCC AGTGCGTAAA
CTGGGTCTGA ACTCAGATTA CACAGTGTTC GACCAAATCA TCATGGACTC TGAGTTAATC
GAAGGTGTTG AAACTGACCA ATGGTTCTAC ACAGGTATGG ATTGCTATAT CCACTGCGTT
GAATCATTAG AAGGTACCTT CTTAAACGAA TTCTCTAAGT CATACGCCGA AAAAGCCATG
GAGCTTTGCC GCCAAGTGTA CTTAGAAGAT CACCCAGAAA AAGACGACAA GCTGATGATG
GCGTCATTTA TGGGCGGTAT GAGTATCGCT TACAGCCAAG TGGGTGCATG CCACGCGGTA
TCTTATGGTC TGTCTTACAT CCTCGGCTAC CACCATGGTA TCGGTAACTG TATCGCCTTC
GACGTGTTAG AAGAATTCTA CCCAGAAGGT GTAGCTGAAT TCCGTCTGAT GATGAAGAAG
CACAACATCA CTCTGCCGAA GAACATCTGT AAAGATCTGC CAGATGAAAC CATCGCGAAA
ATGGTTGCCG TGACTAAGAG CATGGGTCCA TTATGGGCAA ACGTGTACGG CCCAACATGG
GAAGAAAAAG TCACTGACGA AATGTTGACT GCGCTGTTCC GTCGCATTTA A
 
Protein sequence
MSFKNFKVVE KMIFGRGSFA QLDEVLAAQR KADDDFVVFL VDDVHQGKPL EARIPVKAQD 
LLIWVNVDDE PSTVQIDTLT EQVQAFNGKQ PVSVVGLGGG STMDVAKAVS LMLTNPGGSA
MYQGWDLIKN PAVHHIGIPT ISGTGAEASR TAVLCGPVRK LGLNSDYTVF DQIIMDSELI
EGVETDQWFY TGMDCYIHCV ESLEGTFLNE FSKSYAEKAM ELCRQVYLED HPEKDDKLMM
ASFMGGMSIA YSQVGACHAV SYGLSYILGY HHGIGNCIAF DVLEEFYPEG VAEFRLMMKK
HNITLPKNIC KDLPDETIAK MVAVTKSMGP LWANVYGPTW EEKVTDEMLT ALFRRI