| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1900 |
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| Symbol | |
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| ID | 4478208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2255470 |
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| End bp | 2257959 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726482 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_869537 |
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| Protein GI | 117920345 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000194918 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAGAC GTGACTTTAT CAAAGCCAAT GCGGTGATTG CAGCAGCGGG CGCCGCAGGC
TTAGCGCTGC CGGCATCGGC GAGCAATTTA ATCACCAGCT CAGAACAAAC CAAATTAGAG
TGGAACAAAG CCCCATGCCG CTTCTGTGGT ACGGGCTGCT CTGTGATTGT CGCGACCCGC
GAGGGCAAAG TAGTTGCTAC CCACGGCGAT GCAAACAGTG AAGTGAACCG CGGCCTTAAC
TGTATTAAAG GTTATTTCCT GTCGAAAATT ATGTACGGCA GCGATCGTTT GACCACGCCA
ATGCTGAGAA TGACCGACGG CAAATACGAC AAGCATGGTG AGTTTACTCC CATCAGCTGG
GACAGTGCCT TCGATATCAT GGCGCAAAAA TGGAAAGAAA CCTTAAAAGC TAAAGGCCCG
ACCGCGGTTG GGATGTTTGG CTCGGGTCAG TGGACCGTTT GGGAAGGCTA TGCCGCCGTT
AAATTGATGA AGGCCGGTTT TGGCTCTAAC AACATCGACC CGAATGCGCG TCACTGTATG
GCGTCTGCCG TTGTCGGCTT TATGCGTACC TTCGGTATCG ATGAGCCTAT GGGCTGTTAC
GATGATATGG AAGCGGCCGA TGCCTTTGTG CTTTGGGGCT CCAACATGGC CGAAATGCAC
CCGATCTTAT GGACTCGAGT GACTGACCGT CGTTTAAGCG CATCCCATGT GAAGGTGGCT
GTACTCTCGA CGTTTGAGCA TCGCTCCTTC GATCTCGCGG ATTTACCGAT AGTATTTACG
CCACAAACCG ACTTAGCCAT CCTAAACTTT ATCGCCAACT ACATTATTCA AAACGATAAA
GTGAACTGGG ACTTTGTGAA GAAGCACGTT AACTTCCGCC AAGGTACCAC GGATATCGGC
TATGGTTTAC GTCCAACCCA TCCGCTGGAG CAGAAAGCCA AAAACGTGAA AACGGCAGGG
GATTCGACTC CAATTGATTT CGACACCTTT AAGGCTTTTG TCGCCGAATA TACGGTGGAG
AAGGTCAGCA AGATGTCGGG CGTACCTGAA GCTAAACTTA TCGAGTTAGC TAAACTCTAT
GCCGATCCCG AGACTAAAGT CACGTCCTTC TGGACCATGG GCTTCAACCA ACATACCCGT
GGTGTATGGT GTAACAACCT GATTTATAAC ATCCACTTAC TGACAGGTAA GATTTCAACG
CCCGGTAACA GCCCGTTCTC GTTAACCGGT CAGCCTTCTG CCTGTGGTAC GGCTCGCGAA
GTGGGAACCT TCTCACACCG TTTACCTGCC GACATGGTGG TAACAAACCC TGAGCATAGA
AAACACGCCG AAGAAATTTG GAAGATCCCC AGTGGGATTA TTCCGCCAAA ACCCGGTTAT
CACGCCGTCG AGCAAAACCG CCGCTTAAAA GATGGCGACT TGAACTGCTA TTGGGTGCAA
GTGAACAACA ATATGCAGGC GGGGCCGAAC ATCAACGAGG AAGGCTTACC TGGCTATCGT
AATCCTGCCA ACTTTATTGT GGTGTCCGAT GCGTATCCCA CTGTCACGAC TCAGGCCGCG
GACTTAATTC TGCCAACCGC CATGTGGGTT GAGAAAGAGG GTGCCTACGG TAATGCCGAG
CGTCGTACTC AATTCTGGCA TCAAATGGTG CAGGCGCCGG GCGAATCTCA CTCGGATCTG
TGGCAATTGA TGGAGTTCTC TAAGCGCTTT ACGACCGATG AAGTCTGGTC GAAGGAAGTC
CTAGCGGCGA ATCCACAATT TAAGGGCAAA ACCTTATTTG AAGTGCTGTA CAAAAACGGC
AATGTCGATA AGTTCCCGCT GGCCGATACC GATCCTAAGT ATTTGAACAA CGAAGCGAAA
CATTTTGGCT TCTATGTCCA AAAAGGCCTG TTTGAAGAAT ACGCCACCTT TGGCCGTGGC
CATGGTCACG ATTTAGCACC TTTCGATGCC TACCACGAAG CCCACGGTAT TCGCTGGCCG
GTGGTCGATG GTAAAGAAAC CAAATGGCGT TTCCGTGAGG GCAGCGATCC TTATGTCAAA
CCTGGCTCAG GCTTTGAGTT TTACGGTAAA CCCGATGGCC GCGCAGTGAT TTATGCCTTG
CCCTTCGAGC CGCCCGCAGA GTCGCCAGAC ACTGAATACG ATATGTGGTT ATCCACCGGA
CGGGTGCTTG AGCATTGGCA TTCAGGTTCG ATGACTCAAC GCGTGCCAGA GCTTTACCGT
GCCTTCCCGG ATGCCGTGTG TTTTATGCAC CCAGAAGATG CGAAAAAACG CGGTTTACGC
CGTGGGGATG AAGTGCGCGT GGTGTCTCGC CGCGGTGAAA TCAAAACCCG TGTCGAAACC
CGTGGTCGTA ACAAACCACC AGTGGGACTC GTGTTCGTAC CTTGGTTCGA TGCCAGTCAG
CTCATTAACA AAGTCACCTT GGATGCGACA GATCCTCTGT CAAAACAAAC CGACTTTAAG
AAATGCGCCG TGAAAATCGT CAAGGTATAA
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| Protein sequence | MNRRDFIKAN AVIAAAGAAG LALPASASNL ITSSEQTKLE WNKAPCRFCG TGCSVIVATR
EGKVVATHGD ANSEVNRGLN CIKGYFLSKI MYGSDRLTTP MLRMTDGKYD KHGEFTPISW
DSAFDIMAQK WKETLKAKGP TAVGMFGSGQ WTVWEGYAAV KLMKAGFGSN NIDPNARHCM
ASAVVGFMRT FGIDEPMGCY DDMEAADAFV LWGSNMAEMH PILWTRVTDR RLSASHVKVA
VLSTFEHRSF DLADLPIVFT PQTDLAILNF IANYIIQNDK VNWDFVKKHV NFRQGTTDIG
YGLRPTHPLE QKAKNVKTAG DSTPIDFDTF KAFVAEYTVE KVSKMSGVPE AKLIELAKLY
ADPETKVTSF WTMGFNQHTR GVWCNNLIYN IHLLTGKIST PGNSPFSLTG QPSACGTARE
VGTFSHRLPA DMVVTNPEHR KHAEEIWKIP SGIIPPKPGY HAVEQNRRLK DGDLNCYWVQ
VNNNMQAGPN INEEGLPGYR NPANFIVVSD AYPTVTTQAA DLILPTAMWV EKEGAYGNAE
RRTQFWHQMV QAPGESHSDL WQLMEFSKRF TTDEVWSKEV LAANPQFKGK TLFEVLYKNG
NVDKFPLADT DPKYLNNEAK HFGFYVQKGL FEEYATFGRG HGHDLAPFDA YHEAHGIRWP
VVDGKETKWR FREGSDPYVK PGSGFEFYGK PDGRAVIYAL PFEPPAESPD TEYDMWLSTG
RVLEHWHSGS MTQRVPELYR AFPDAVCFMH PEDAKKRGLR RGDEVRVVSR RGEIKTRVET
RGRNKPPVGL VFVPWFDASQ LINKVTLDAT DPLSKQTDFK KCAVKIVKV
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