| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1894 |
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| Symbol | |
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| ID | 4478202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2246618 |
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| End bp | 2248393 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726476 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_869531 |
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| Protein GI | 117920339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000282566 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGCCG ATAACTTGTT AACGCTTTCA GTGAACGGGG TCGACGAAGC CCTAAAGCGT
AATATTCTCG CCCACTTAGG TGCTATGCCC GACTCCGAAG TGCAGCGCCG AGCCTTCTTA
TTTAACGTGG AAGACAATGT CTCCACCGCC CTCGAGTCCA TGGGCTATTA CCATGGCGAA
GTGGAAGAAC AGTTAGTCGA AAAAGAAAAA GGCCCATGGG AATTAAAGCT CACGGTCAAA
GCGGGCGAAC CGGTAAAGAT CCAATGGGTT GATATTAATT TTTCCGGTGA GATGCTCGAC
GATCGCGCCT TCGATAAGTG GCTTGCGGAG GTGAATATCA AGCCTGGGGA TACGCTCAAC
CATGGGGTAT ATGCCGATGT GAAATCCCAA CTGGTGACGC TTGCCTTGGC GAGGGGGTAT
TTCGATGGCG AATTCACCGA GTCACAAATC AAAATCAACC GCGATTTAAA CACGGCGCAA
ATTAGCCTGC ATTTTAATTC AGGCGCACGT TACCGTTTTG GACAAGTAAG CTTTGAGGGA
CACACCTTAG AGCCGGATAT TCTCACTAAA CTTATCCCTT TCAAAGAAGA TGCGGCCTAT
TCGACCCGTC GGGTCAGCTC TCTAAACCGC CAATTGTTGG ATACGGGCTA TTTCGCCAAT
ATCAAGGTCA TACCGCAGAT AGATCAGGCA AAGGATAACC AGTTGCCCGT CAAGGTGGAG
CTCACCAATA AGGCCAGCCA CTCGATTGAA TTAGGTCTCG GTGGCGACAT AGGTCAAAGC
GCAGATAAAA CCTTCGATCC GCGAGTACGG GTCACTTGGC GTACGCCACA AATCAATAAA
TACGGTCACT CCCAAGAAAC CAGTTTGGAG TGGTCGCCTG ACAGGCCTAA GTTTTTAACC
ACTTATACGA TTCCGCTGAC TCATCCCTTA GACGATCAAC TCAAAATTCG CCTAGGCTTG
CTGCGGGATA AATACGGGGT GACCCAGATT TACGAGCCCG AGAACCGCGA TTTTCGTAAC
ACGGGACAAC TGGAATCGAC TAAGTATTTG CTCGGACTAC TCAGGCAGCA ACGCTTGGAT
AATCAATGGC TGATGACCTA TTCCCTCGAT GCGATTCGCG AGGAATATAC TCAGTCCGAT
ACCGATTACA GCCCCAGTTT TTATCTGGCG GGGATTAACT TTTCTAAAAC GACCCGTGGG
GATAACTCAC TCGATCCTAA GTCTGGTTTC AGGCAAATGT ATAGCTTAGA TTATGCCGAT
CCTTATCTTG GCTCCGAGAC ACGCCTTGCC CGCTTACAGG CCAAGTTTAA GTGGATTGAC
ACCTTTTTTG ATAACCACAG AATCGTGGCG CGTATGGATC TCGCCGCCAA CTTAGCCAAT
GAAAATGAGC TGGCCTTTAT TCCACCATCA CTGCGCTATT TTGCCGGTGG CGACCAAACC
ATACGTGGTT ATGGCTATCA AGAACTTGGG CCTTATCTCG ATTACATCGA TGCCGATGGC
AAAGTCAATC GTGAAGTTAT CGGTGGTCGT TATCTCATGG TTGGCAGTTT GGAATATCAA
TATTACGTCA CCCCGACTTG GCGTGTTGCC ACCTTTGTGG ATGCGGGTAA CGCCTTTGAT
AACAATCAGT TTGAACCCGT AGTCTCAGTG GGTGGTGGTA TCCATTGGAT CTCCCCCATT
GGCCCAATTA AGTTAGATTT AGGGGTTGGT TTGAAAGAGA CAGACACCAT TGACCGTTCA
TGGCGCATTC ACTTAACCAT GGGGACAGAG CTATGA
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| Protein sequence | MAADNLLTLS VNGVDEALKR NILAHLGAMP DSEVQRRAFL FNVEDNVSTA LESMGYYHGE
VEEQLVEKEK GPWELKLTVK AGEPVKIQWV DINFSGEMLD DRAFDKWLAE VNIKPGDTLN
HGVYADVKSQ LVTLALARGY FDGEFTESQI KINRDLNTAQ ISLHFNSGAR YRFGQVSFEG
HTLEPDILTK LIPFKEDAAY STRRVSSLNR QLLDTGYFAN IKVIPQIDQA KDNQLPVKVE
LTNKASHSIE LGLGGDIGQS ADKTFDPRVR VTWRTPQINK YGHSQETSLE WSPDRPKFLT
TYTIPLTHPL DDQLKIRLGL LRDKYGVTQI YEPENRDFRN TGQLESTKYL LGLLRQQRLD
NQWLMTYSLD AIREEYTQSD TDYSPSFYLA GINFSKTTRG DNSLDPKSGF RQMYSLDYAD
PYLGSETRLA RLQAKFKWID TFFDNHRIVA RMDLAANLAN ENELAFIPPS LRYFAGGDQT
IRGYGYQELG PYLDYIDADG KVNREVIGGR YLMVGSLEYQ YYVTPTWRVA TFVDAGNAFD
NNQFEPVVSV GGGIHWISPI GPIKLDLGVG LKETDTIDRS WRIHLTMGTE L
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