Gene Shewana3_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1890 
Symbol 
ID4478198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2240629 
End bp2241177 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID639726472 
Producthypothetical protein 
Protein accessionYP_869527 
Protein GI117920335 
COG category[S] Function unknown 
COG ID[COG3108] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.186402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTTAC TTTGTCCTGC CCGTAGGCAG TTGTTGTTAG GCCTCAGTGG TGTGGCATTG 
TGTTCTTTAA TTCCTTCTAA AGCGTTTGCA AGTCGGTCGA CCAAAGGGGT TCGCGATCTC
AGCCTCTACA ATCGCCACAC GGGCGAGCAT AACAATGGCA GTTATTGGAT TGACGGCCAT
TACCAGAGCG AAGTGTTGAA TGATTTTAGT CACTTGCTGC GGGATCATCG CCAGAATGTG
GCGGCGCCCA TGGATAAACG CTTATTCGAT CTGCTTTACA CCCTCAAGAG CACCCTCAAT
ACGGAGAATG AGATCCATGT GATTTCTGGT TATCGTTCGC CCAAGACTAA CGCCATGTTG
GCGGGTAAGA GCAGTGGGGT GGCAAAGAAA AGTTATCACA TGCAAGGCAT GGCAATGGAC
ATCGCTATCC CGGGTGTGAA CCTAAAGACC CTTCGTGATG CGGCGTTATC GCTTAAATTA
GGAGGAGTGG GTTATTACCC TAAGTCAGGT TTTGTGCATG TTGACTGTGG CCCAGTCCGC
CACTGGTAG
 
Protein sequence
MTLLCPARRQ LLLGLSGVAL CSLIPSKAFA SRSTKGVRDL SLYNRHTGEH NNGSYWIDGH 
YQSEVLNDFS HLLRDHRQNV AAPMDKRLFD LLYTLKSTLN TENEIHVISG YRSPKTNAML
AGKSSGVAKK SYHMQGMAMD IAIPGVNLKT LRDAALSLKL GGVGYYPKSG FVHVDCGPVR
HW