Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1890 |
Symbol | |
ID | 4478198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2240629 |
End bp | 2241177 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639726472 |
Product | hypothetical protein |
Protein accession | YP_869527 |
Protein GI | 117920335 |
COG category | [S] Function unknown |
COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.186402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGTTAC TTTGTCCTGC CCGTAGGCAG TTGTTGTTAG GCCTCAGTGG TGTGGCATTG TGTTCTTTAA TTCCTTCTAA AGCGTTTGCA AGTCGGTCGA CCAAAGGGGT TCGCGATCTC AGCCTCTACA ATCGCCACAC GGGCGAGCAT AACAATGGCA GTTATTGGAT TGACGGCCAT TACCAGAGCG AAGTGTTGAA TGATTTTAGT CACTTGCTGC GGGATCATCG CCAGAATGTG GCGGCGCCCA TGGATAAACG CTTATTCGAT CTGCTTTACA CCCTCAAGAG CACCCTCAAT ACGGAGAATG AGATCCATGT GATTTCTGGT TATCGTTCGC CCAAGACTAA CGCCATGTTG GCGGGTAAGA GCAGTGGGGT GGCAAAGAAA AGTTATCACA TGCAAGGCAT GGCAATGGAC ATCGCTATCC CGGGTGTGAA CCTAAAGACC CTTCGTGATG CGGCGTTATC GCTTAAATTA GGAGGAGTGG GTTATTACCC TAAGTCAGGT TTTGTGCATG TTGACTGTGG CCCAGTCCGC CACTGGTAG
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Protein sequence | MTLLCPARRQ LLLGLSGVAL CSLIPSKAFA SRSTKGVRDL SLYNRHTGEH NNGSYWIDGH YQSEVLNDFS HLLRDHRQNV AAPMDKRLFD LLYTLKSTLN TENEIHVISG YRSPKTNAML AGKSSGVAKK SYHMQGMAMD IAIPGVNLKT LRDAALSLKL GGVGYYPKSG FVHVDCGPVR HW
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