Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1888 |
Symbol | |
ID | 4478196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2236415 |
End bp | 2238598 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639726470 |
Product | glucosyltransferase MdoH |
Protein accession | YP_869525 |
Protein GI | 117920333 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2943] Membrane glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.54416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.670197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGTAT CCGAGAATTC GGTTCTTGAG ACTGAAGTGC TCGTGGGTGG TAGCGCCATG CCTAATGAAA GGCCTGGCGC AATGGAACCC CAAAGCTTAA GCCAAATGCC TGAAGGATTT CCGCGTCGTA GCACCGTTGC CAATGGTGTA CGTTCTAAGG TATCCCGTCG ATTCTTTGTC GTGGGCGGAG CTCTGGCGCT GTCTGCTTTT GCTATCTACG AAATGGGCGC TGTATTCAGT ATCGGAGGGA TCACTCCCCT CGAATATCTG ATGTTGGCGC TGTTTGCGAT TAATTTCTGC TGGATTGCCT TGGCGTTTTG TAGTGGTATC GCAGGCTTCT TCATGTTGCT GAAAAAGCCC AAGCCAAACG AGCTTGAACA GACTGAGCTA CATACCCGCA CCGCGATTTT GATGCCAACC TATAACGAGT CGCCTGATCG GGTGTTCTCC GCGGTATCAG TGATGGCGGA AGCCTTATCC CAAACGGGGC ATGGCCATGC ATTCGATTGG TTTATCTTAA GTGATACCAC AGATCCTGAA ATCGCCCTGT TAGAAGAACA GGCGTTTTTA GTGCTACGCC AAGAAACCCA TAAACATTCT CGCGTGTATT ACCGCCGCCG TCGTAAGAAC GTGGCGCGTA AAGCGGGTAA CGTGGCGGAT TTCTGCCGCC GATGGGGCTC TCGCTACGAT CACTTATTGG TGCTGGACGC TGACAGTTTG ATGGAGTCAT CGACCATCAC TGGCTTAGCA CAACGTATGC AGGCCGATCC TGACGCCGGA CTTATCCAGA CGATTCCATC GCTCATCAAT GGCACCACCT TAATGGCGCG TCTGCAGCAG TTTGCGGCGC GTATTTATGG TCCTGTGATT GGTACGGGGC TTGGTTGGTG GGTACAAAAA GAAGGTAACT TCTGGGGCCA TAACGCTATT ATTCGTACCG AAGCCTTTAT GGGCGCAGCA GGTCTACCAA ACCTTAAGGG TAAACCGCCA TTTGGTGGTC ATATCCTAAG CCATGACTTT GTCGAAGCGG CGCTGATTCG CCGTGCGGGC TGGAGTGTGG TCATTGCCTA CGACTTACCC GGCTCTTATG AAGAATGTCC GCCATCTATT GTCGATTTAG CCGTGCGCGA TCGCCGTTGG TGTCAAGGTA ACTTACAGCA TTCCCGTATT CTGCCAACTA AAGGTTTGCA CTGGGTCAGC CGTTTGCACT TAATGACGGG CATTATGGCG TATCTGTCAT CGCCATTCTG GTTGTTATTG ATTCTGACTG GTTTGATGCT CGCGTTGCAG GCACACTTTA TTCGTCCTGA GTATTTTACC GACCAATTCT CGCTGTTCCC GACATGGCCA ATCATGGACT CGGATAGGGC ATTAAGATTG TTCTATATCA CTATGGGCGT GTTGTTTGGA CCTAAGATTT TCGGCGTATT ATTGCTGCTA AAAGATGGAA ATTTTGCCCG CAGTGTCGGT GGTCGCATCA AGGCGATTTT GAGCGTGATC TTTGAGGTGA TCCTCTCTGC GCTAATCGCA CCTATCATGA TGTTTATCCA CTGCGGTGCG GTGATGTCGA TTCTGATGGG GCGTGACAGT GGCTGGTCTC CACAGCGCCG TGACGATGGC AGCATGCCTT GGTTAACCCT GATCTATCGC CACCGCTGGC ATATGCTGGC GGGCGTGATG TTAGGTTATG CGGCGATTTT GGACTCCTTA ACATTGCTTG CGTGGATGAG CCCCGCCTTG ATTGGTCTGT GGTTAGCCGT GCCGATTTCG GCGTGGACGG GGTCAATCAA AATTGGTGAG TTCTTTAAAC GCATTGGCAT TTTGGCCACG CCAGAGGAGC GTAATCCTGC GCCTATCTGT ATTCGTGCTC AAGAGGCACG TGCCGCTTAT CAGGCGCATA TCGAGCAGCC TTGGACATTA GCGCAAGTGT TAAAAGATCC AGCGTTAATG GAACTGCATT TAGCTATGGT TGATAAGCAG CCACTGCGTG CGGCGGGTAC ACCCATTGAA CCGGTTGAAG CTATTGTGCA CGTAAAAGTG CATGAAGCGC AGTGCCAACA GAGTGCCTTG GCGTTATTTA ACCGTCAGGA GATGGCGCTG GTGCTAGCCA ATCCGCTGAT GCTGCGAAGC TTGCAAAAGC TGCCAGAGCA GTTTGTGCCA GAAGACTTGG TCTCTTTCTG CTAG
|
Protein sequence | MTVSENSVLE TEVLVGGSAM PNERPGAMEP QSLSQMPEGF PRRSTVANGV RSKVSRRFFV VGGALALSAF AIYEMGAVFS IGGITPLEYL MLALFAINFC WIALAFCSGI AGFFMLLKKP KPNELEQTEL HTRTAILMPT YNESPDRVFS AVSVMAEALS QTGHGHAFDW FILSDTTDPE IALLEEQAFL VLRQETHKHS RVYYRRRRKN VARKAGNVAD FCRRWGSRYD HLLVLDADSL MESSTITGLA QRMQADPDAG LIQTIPSLIN GTTLMARLQQ FAARIYGPVI GTGLGWWVQK EGNFWGHNAI IRTEAFMGAA GLPNLKGKPP FGGHILSHDF VEAALIRRAG WSVVIAYDLP GSYEECPPSI VDLAVRDRRW CQGNLQHSRI LPTKGLHWVS RLHLMTGIMA YLSSPFWLLL ILTGLMLALQ AHFIRPEYFT DQFSLFPTWP IMDSDRALRL FYITMGVLFG PKIFGVLLLL KDGNFARSVG GRIKAILSVI FEVILSALIA PIMMFIHCGA VMSILMGRDS GWSPQRRDDG SMPWLTLIYR HRWHMLAGVM LGYAAILDSL TLLAWMSPAL IGLWLAVPIS AWTGSIKIGE FFKRIGILAT PEERNPAPIC IRAQEARAAY QAHIEQPWTL AQVLKDPALM ELHLAMVDKQ PLRAAGTPIE PVEAIVHVKV HEAQCQQSAL ALFNRQEMAL VLANPLMLRS LQKLPEQFVP EDLVSFC
|
| |