Gene Shewana3_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1888 
Symbol 
ID4478196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2236415 
End bp2238598 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content51% 
IMG OID639726470 
Productglucosyltransferase MdoH 
Protein accessionYP_869525 
Protein GI117920333 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2943] Membrane glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.54416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.670197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTAT CCGAGAATTC GGTTCTTGAG ACTGAAGTGC TCGTGGGTGG TAGCGCCATG 
CCTAATGAAA GGCCTGGCGC AATGGAACCC CAAAGCTTAA GCCAAATGCC TGAAGGATTT
CCGCGTCGTA GCACCGTTGC CAATGGTGTA CGTTCTAAGG TATCCCGTCG ATTCTTTGTC
GTGGGCGGAG CTCTGGCGCT GTCTGCTTTT GCTATCTACG AAATGGGCGC TGTATTCAGT
ATCGGAGGGA TCACTCCCCT CGAATATCTG ATGTTGGCGC TGTTTGCGAT TAATTTCTGC
TGGATTGCCT TGGCGTTTTG TAGTGGTATC GCAGGCTTCT TCATGTTGCT GAAAAAGCCC
AAGCCAAACG AGCTTGAACA GACTGAGCTA CATACCCGCA CCGCGATTTT GATGCCAACC
TATAACGAGT CGCCTGATCG GGTGTTCTCC GCGGTATCAG TGATGGCGGA AGCCTTATCC
CAAACGGGGC ATGGCCATGC ATTCGATTGG TTTATCTTAA GTGATACCAC AGATCCTGAA
ATCGCCCTGT TAGAAGAACA GGCGTTTTTA GTGCTACGCC AAGAAACCCA TAAACATTCT
CGCGTGTATT ACCGCCGCCG TCGTAAGAAC GTGGCGCGTA AAGCGGGTAA CGTGGCGGAT
TTCTGCCGCC GATGGGGCTC TCGCTACGAT CACTTATTGG TGCTGGACGC TGACAGTTTG
ATGGAGTCAT CGACCATCAC TGGCTTAGCA CAACGTATGC AGGCCGATCC TGACGCCGGA
CTTATCCAGA CGATTCCATC GCTCATCAAT GGCACCACCT TAATGGCGCG TCTGCAGCAG
TTTGCGGCGC GTATTTATGG TCCTGTGATT GGTACGGGGC TTGGTTGGTG GGTACAAAAA
GAAGGTAACT TCTGGGGCCA TAACGCTATT ATTCGTACCG AAGCCTTTAT GGGCGCAGCA
GGTCTACCAA ACCTTAAGGG TAAACCGCCA TTTGGTGGTC ATATCCTAAG CCATGACTTT
GTCGAAGCGG CGCTGATTCG CCGTGCGGGC TGGAGTGTGG TCATTGCCTA CGACTTACCC
GGCTCTTATG AAGAATGTCC GCCATCTATT GTCGATTTAG CCGTGCGCGA TCGCCGTTGG
TGTCAAGGTA ACTTACAGCA TTCCCGTATT CTGCCAACTA AAGGTTTGCA CTGGGTCAGC
CGTTTGCACT TAATGACGGG CATTATGGCG TATCTGTCAT CGCCATTCTG GTTGTTATTG
ATTCTGACTG GTTTGATGCT CGCGTTGCAG GCACACTTTA TTCGTCCTGA GTATTTTACC
GACCAATTCT CGCTGTTCCC GACATGGCCA ATCATGGACT CGGATAGGGC ATTAAGATTG
TTCTATATCA CTATGGGCGT GTTGTTTGGA CCTAAGATTT TCGGCGTATT ATTGCTGCTA
AAAGATGGAA ATTTTGCCCG CAGTGTCGGT GGTCGCATCA AGGCGATTTT GAGCGTGATC
TTTGAGGTGA TCCTCTCTGC GCTAATCGCA CCTATCATGA TGTTTATCCA CTGCGGTGCG
GTGATGTCGA TTCTGATGGG GCGTGACAGT GGCTGGTCTC CACAGCGCCG TGACGATGGC
AGCATGCCTT GGTTAACCCT GATCTATCGC CACCGCTGGC ATATGCTGGC GGGCGTGATG
TTAGGTTATG CGGCGATTTT GGACTCCTTA ACATTGCTTG CGTGGATGAG CCCCGCCTTG
ATTGGTCTGT GGTTAGCCGT GCCGATTTCG GCGTGGACGG GGTCAATCAA AATTGGTGAG
TTCTTTAAAC GCATTGGCAT TTTGGCCACG CCAGAGGAGC GTAATCCTGC GCCTATCTGT
ATTCGTGCTC AAGAGGCACG TGCCGCTTAT CAGGCGCATA TCGAGCAGCC TTGGACATTA
GCGCAAGTGT TAAAAGATCC AGCGTTAATG GAACTGCATT TAGCTATGGT TGATAAGCAG
CCACTGCGTG CGGCGGGTAC ACCCATTGAA CCGGTTGAAG CTATTGTGCA CGTAAAAGTG
CATGAAGCGC AGTGCCAACA GAGTGCCTTG GCGTTATTTA ACCGTCAGGA GATGGCGCTG
GTGCTAGCCA ATCCGCTGAT GCTGCGAAGC TTGCAAAAGC TGCCAGAGCA GTTTGTGCCA
GAAGACTTGG TCTCTTTCTG CTAG
 
Protein sequence
MTVSENSVLE TEVLVGGSAM PNERPGAMEP QSLSQMPEGF PRRSTVANGV RSKVSRRFFV 
VGGALALSAF AIYEMGAVFS IGGITPLEYL MLALFAINFC WIALAFCSGI AGFFMLLKKP
KPNELEQTEL HTRTAILMPT YNESPDRVFS AVSVMAEALS QTGHGHAFDW FILSDTTDPE
IALLEEQAFL VLRQETHKHS RVYYRRRRKN VARKAGNVAD FCRRWGSRYD HLLVLDADSL
MESSTITGLA QRMQADPDAG LIQTIPSLIN GTTLMARLQQ FAARIYGPVI GTGLGWWVQK
EGNFWGHNAI IRTEAFMGAA GLPNLKGKPP FGGHILSHDF VEAALIRRAG WSVVIAYDLP
GSYEECPPSI VDLAVRDRRW CQGNLQHSRI LPTKGLHWVS RLHLMTGIMA YLSSPFWLLL
ILTGLMLALQ AHFIRPEYFT DQFSLFPTWP IMDSDRALRL FYITMGVLFG PKIFGVLLLL
KDGNFARSVG GRIKAILSVI FEVILSALIA PIMMFIHCGA VMSILMGRDS GWSPQRRDDG
SMPWLTLIYR HRWHMLAGVM LGYAAILDSL TLLAWMSPAL IGLWLAVPIS AWTGSIKIGE
FFKRIGILAT PEERNPAPIC IRAQEARAAY QAHIEQPWTL AQVLKDPALM ELHLAMVDKQ
PLRAAGTPIE PVEAIVHVKV HEAQCQQSAL ALFNRQEMAL VLANPLMLRS LQKLPEQFVP
EDLVSFC