Gene Shewana3_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1886 
Symbol 
ID4478194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2232915 
End bp2234309 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content50% 
IMG OID639726468 
ProductATPase domain-containing protein 
Protein accessionYP_869523 
Protein GI117920331 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCGAC TCAAGGTGCT GGATGTGTAC TCATTACGTT TGTTATTAAC CTTGCTGATG 
CTCTCGGGGA TTTCGGTTTC CGTGGGTATT TCAAGCTGGT TCAGCACCCG GGATTCTAAG
CATCAAATCG AAGAGTTATT TGATGCGCAA ATGCTGCAAA GCGCGAAAAT GCTTGAGCTT
TTTTATCACG ATGAGGCGGA ATTTAAAACG CCACAAGAGC TGCCGCAAGT TCTCCATGTC
CCCGATAGCC AGATCAGTAC CTTTGCTCAA AAGGCCGATG CATTAAAGCT GGCCTATGAG
CACAAACTCG CATTTCAGAT CTGGAGCGAG GCGGGGCAAG CGCTGGTGTT TTCAGACAAT
ATCGGCCGAC AACCCATAAC TAAGTTTGTT CAAGGCTATA GCAAAAAAGT GTTTGAAGGG
GAGCTGTGGC ATGTGTTCAG TTTTTTTTCG GTCAAACACA AAGTCTGGAT AATCACAGCC
CAGCAAGATG AAGTGCGCCA AGAGCTGGTC TCGCAAATTA TGCACAATGC CGTAATCGTG
CCGCTGATCG TTGTGCCCTT GACCTTACTT ATCGTCAGCT TGCTGTTTTA CATCTTGTTC
CGGCCGTTGA AGTCCTTCGA GCGCGAGTTA ATGGCACGCT CGCCTAACGA TCTCACGCCG
CTCACTATGT CACTGCCTAA GGAGCTTGTG CCTGTGCGCC GCGCGCTAAA CCAATATATC
AGCAGCATTG CGCACTTTAT TGCGAGGGAG CGTCGCTTTA GTGCCGATGC GGCCCATGAG
TTAAAAACCC CCTTATCCGT GATTAAATTA CATCAACAGG GGTTAGAAGG TTTAGTGGGC
GAGGGTGATG CGGAGCGTAT TCACCTTGCC GCTATCGATG CCGGTGTGAA GCATATGAGT
CACACCGTTG AGCAACTTTT GTTGCTTGCG CGGGTCGATT CGATTGCCGA ACTCAATGTG
CAACCTCATC TGTTACTGCC AATGGTGGAA GATGCGCTGA ATCAGCTAAT GCCACTGATC
ACCGACTATG AATGGCAAAT CGAGATCGAT GCGGCATTAA CGCTCAACTG CGATCGGTTT
TACCTGCTGA TCGTGCTAAA AAACATCATC GAAAATGCCT GTAAATACAG TCCTGTCGAA
ACTGAGATTA GTATCAGTGC CGCAGTCACC CACACCCATG TCGAGATAAA GATCGCCGAC
CGCGGGCAGG GCATGACTCT GGAGCAAATC GCCAGTGCGA CGGAGCGTTT TTACCGCGTC
AATGAAAATG AAGGAATAGG CGCGGGATTG GGGCTGTCCA TCTGCCACCA CATCATTGAT
TTACACCAAG GAGAATTGAC GATCACGCCC CGTGAAAATG GCGGTTTAGT GGTCACGCTT
GCGCTTCCCC TGTAA
 
Protein sequence
MNRLKVLDVY SLRLLLTLLM LSGISVSVGI SSWFSTRDSK HQIEELFDAQ MLQSAKMLEL 
FYHDEAEFKT PQELPQVLHV PDSQISTFAQ KADALKLAYE HKLAFQIWSE AGQALVFSDN
IGRQPITKFV QGYSKKVFEG ELWHVFSFFS VKHKVWIITA QQDEVRQELV SQIMHNAVIV
PLIVVPLTLL IVSLLFYILF RPLKSFEREL MARSPNDLTP LTMSLPKELV PVRRALNQYI
SSIAHFIARE RRFSADAAHE LKTPLSVIKL HQQGLEGLVG EGDAERIHLA AIDAGVKHMS
HTVEQLLLLA RVDSIAELNV QPHLLLPMVE DALNQLMPLI TDYEWQIEID AALTLNCDRF
YLLIVLKNII ENACKYSPVE TEISISAAVT HTHVEIKIAD RGQGMTLEQI ASATERFYRV
NENEGIGAGL GLSICHHIID LHQGELTITP RENGGLVVTL ALPL