Gene Shewana3_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1883 
Symbol 
ID4478191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2229785 
End bp2231131 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content49% 
IMG OID639726465 
Producthypothetical protein 
Protein accessionYP_869520 
Protein GI117920328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0134121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA ATAACAATAA GTTAGACTCA ATAGCCCCAC AAGTTCTCCA AGCTAAACCG 
CAGACTAAAC ACATTGCTAG TGCCTTGGCT TTAGCCAGTT GTGGCTTGTT TGTCTCTAAT
GGTCACGCCT CTGAGCTTGC AAAAAATGCC GATGATTGGA AAGTCGATGC CGCGCTTATG
TATTACGGTG AGCAAGACAG GGTGCAGGCA ATCGAAGCCA TTGGGACGGC GCAAAAAAAC
TTTGGCGACG ACAGTGTGTT GGATTTAAAA CTGGTGGTCG ACAGTTTAAC CGGTGCTTCG
GCTTCAGGCG CGGTAGCCCA AAGCGACAGC CAAACCTTTA CCCGTCCTTC CGGTAATGGC
CAGTATAAAG TGGCGGCGGG TGAGACACCG CTCGATGATA CCTTCCACGA TACCCGAGTA
CAGGGCAGTG CTAACTGGTC ACAGGCGCTT AATTCCGATT GGAAAGTCAA CGGCGGCGTC
TATGGCTCTA AGGAATTCGA CTATATGTCG ATGGGCATCA ATGCCGGGCT AGAACGTGGT
TTTAACAAGG ACAACACCAC GCTGTTTTTA GGGACGTCTT ACAGCTTCGA TGTGGTTGAT
CCCGTGGGTG GCAGACCCGT GGCCTTATCC TCTATGGCGA TCCGCGATAA CTTTACCACG
GATGAAGCCT ATCGCGCGGC ATTCGATGCG ACTCGCCAAA CGAGCAGCGA TGATAAACAA
ACCGTCGATT TGATGTTAGG TATTACCCAA ATATTGAATC AGCGGTGGTT ATTGCAGGCG
AACTATGGAT TATCCAGTGT CAGCGGCTAT TTAACCGATC CCTATAAAGT GTTGAGTGTG
GTGGACAATA ACGGCACCAC TGAGGACATA GTCTACGAGA ATCGCCCCGA TTCGCGCCTG
AAACACAGCT TTTATGTGAT GACCAAAGGC GCACTCGATT CAGGTGTTGT GGACTTTTCC
TACCGCTATA GCACCGACGA TTGGGATTTA ACTTCGCACA CCTTAGAAAC CCACTACCGC
TATTACTTTA GTGGCAATTT CTACGGGCAA TTGCACTTAC GTTATTACCA ACAGTCGGCG
GTGAATTTCT ATCAGCCGTT CCTGCTTGCC GATACGCCGC TACCCGAGTT TGCCAGTGCG
GATTACCGCA TTGGTGATAT GAGTGCTTAT ACCATAGGGG TTAAGTTTGG CCACCGTCTG
TCAGGCGGCC ATGAGATGAC GTATCGCTTG GAATATTACC AACAGGATCC GAAAAACAAT
GGCACAACGA TCCCTGGCGA GCTGCAAAAC TACGACTTGT TCCCAACCCA AAAGGCGATA
ACGGCGCAGT TTAGTTATTC ATTTTAA
 
Protein sequence
MTNNNNKLDS IAPQVLQAKP QTKHIASALA LASCGLFVSN GHASELAKNA DDWKVDAALM 
YYGEQDRVQA IEAIGTAQKN FGDDSVLDLK LVVDSLTGAS ASGAVAQSDS QTFTRPSGNG
QYKVAAGETP LDDTFHDTRV QGSANWSQAL NSDWKVNGGV YGSKEFDYMS MGINAGLERG
FNKDNTTLFL GTSYSFDVVD PVGGRPVALS SMAIRDNFTT DEAYRAAFDA TRQTSSDDKQ
TVDLMLGITQ ILNQRWLLQA NYGLSSVSGY LTDPYKVLSV VDNNGTTEDI VYENRPDSRL
KHSFYVMTKG ALDSGVVDFS YRYSTDDWDL TSHTLETHYR YYFSGNFYGQ LHLRYYQQSA
VNFYQPFLLA DTPLPEFASA DYRIGDMSAY TIGVKFGHRL SGGHEMTYRL EYYQQDPKNN
GTTIPGELQN YDLFPTQKAI TAQFSYSF