| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1880 |
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| Symbol | |
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| ID | 4478188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2227512 |
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| End bp | 2228648 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639726462 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_869517 |
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| Protein GI | 117920325 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAC ATGCAGCCCT CTATGAACAG GGAAAGGCGC GCTTAGACGC ACTGCGCCAA
CTCGCTCCCC GTCAACAGCA AACATTAATC GAAAAATTAC AACAACACGG CATCACTCGT
CGTGACTTTA TGAAGTGGAG CGCCATGGTG ACGGGCATGC TCGCCCTACC GCTGCCCTTT
AGTAACTTAG TTGCCGAAGC CGCCGAACTG GCCGACCGTG TACCCTTAAT CTGGTTACAC
ATGGCCGAAT GTACTGGCTG CTCTGAATCC TTAGTGCGCG CCGATACGCC TAATTTAGAT
TCGCTGATCT TCGACCATAT CTCGTTGGAA TATCACGAAA CCTTAATGGC CGCTGCCGGC
TGGCAAGCAG AGGAAAACCT CGAGCACGCT CTTGAAACCT ACAAGGGCCG TTATCTACTC
GCCGTTGAAG GTGCCGTACC GACCGCTAAT AACGGCAGCT TCTTAACCGT GGGCTGTAAA
GGTCATACCG GCTTAGAAAT TATCAAGCAT GCCGCCGAAG ACGCCGCGGC GATTATTTCT
GTGGGCACCT GCGCTTCCTT TGGTGGCGTG CAAGCCGCCT ACCCTAACCC CACAGGGGCG
AAAGGGGTAC ACGAAGTCGT GAGCAAGCCT GTGATCAACT TAGGTGGCTG CCCACCGAGT
GAGAAAAACA TCGTCGGCAC CCTGATGTAT TTCATCATGT TCGGCAAATT ACCCGCGCTG
GATATGTTTA ATCGTCCTAA ATGGGCCTAT GGCGCACGGG TGCACGATAA CTGTGAACGC
CGCGGCCGTT TCGATGCCGG TGAGTTCGTT GAAGAGTTTG GCGATCACGG AGCGAAGGAA
GGTTACTGCC TCTACAAAGT GGGCTGTAAA GGACCTTATA CCTATAACAA CTGTCCTACA
GAGCGCTTTA ACCACCATAC CAGCTGGCCA GTGTTAGCGG GCCACGGTTG TATGGGCTGC
TCAGAACCTA ACTTCTGGGA TGATATGGCC GACTTTGAAA AACCCCTTGG CCGTCAACTA
CTCCATGGAT TGGATGCTAC CGCAGACACA GTCGGTGCGG TGATTTTAGG CGCGACCGTC
GTCGGCATTG GAGCCCACGC CGTCGCCAGT ATTTTTGCCA AGCCGCTGGA GGAATAA
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| Protein sequence | MDTHAALYEQ GKARLDALRQ LAPRQQQTLI EKLQQHGITR RDFMKWSAMV TGMLALPLPF
SNLVAEAAEL ADRVPLIWLH MAECTGCSES LVRADTPNLD SLIFDHISLE YHETLMAAAG
WQAEENLEHA LETYKGRYLL AVEGAVPTAN NGSFLTVGCK GHTGLEIIKH AAEDAAAIIS
VGTCASFGGV QAAYPNPTGA KGVHEVVSKP VINLGGCPPS EKNIVGTLMY FIMFGKLPAL
DMFNRPKWAY GARVHDNCER RGRFDAGEFV EEFGDHGAKE GYCLYKVGCK GPYTYNNCPT
ERFNHHTSWP VLAGHGCMGC SEPNFWDDMA DFEKPLGRQL LHGLDATADT VGAVILGATV
VGIGAHAVAS IFAKPLEE
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