| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1872 |
|---|
| Symbol | |
|---|
| ID | 4477931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 2215904 |
|---|
| End bp | 2218225 |
|---|
| Gene Length | 2322 bp |
|---|
| Protein Length | 773 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639726454 |
|---|
| Product | oxidoreductase alpha (molybdopterin) subunit |
|---|
| Protein accession | YP_869509 |
|---|
| Protein GI | 117920317 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTTC ATATTGAAAA ACCGACCAAA GCCGGCGGCT TCCCCTCACT GCAATCGACC
TTAAAGCATG TGCTGCGCAG CCAAAAGACC CAGCAAAATA TCAAAAACCT GCTCAGGGTG
AACCAAACCG ATGGCTTTGA TTGCCCAGGT TGTGCCTGGG GCGATAACAA GGCAGGCGCC
TTTCAGTTTT GCGAAAATGG CGCTAAAGCC GTGGCCTGGG AATCGACAGG CAAGATTGTC
GATCGCGACT TTTTCGCCCA GTATTCGGTG CGTCAGTTAG CCAAACAGAC CGACTATTGG
CTCGAATATC AGGGTCGCTT GGCCGAACCC ATGCGTTATA ACGCCGCGAC TGATCACTAT
GAACCCATCA GCTGGGATGG AGCCTTTCAG CTGATTGCTG ATACGCTTAA TGGCCTTAGC
GACCCCAATC AAGTCGAGTT TTACACCTCG GGCCGCGCCA GTAACGAGGC CTCCTACCTC
TATCAACTGT TTGGCCGACT ATATGGCACC AATAACTTTC CCGATTGTTC GAATATGTGC
CACGAGGCCA GCGGCGTAGC ACTCAACCAA GCCATTGGTG TCGGTAAAGG CACTGTCGTT
TTAAGTGATT TCGATGCGGC CGAGGCGATT TTTGTCTTCG GGCAAAACCC CGGCACCAAC
CATCCACGGA TGATGAATGC CCTACGTAAA GCGGCCAAAC TGGGTTGTAA AATTGTCACC
TTCAATAACT TAAAGGAAGT GGCGCTGGAG CGATTCGCCA GCCCGCAAAG TCCAACGGAG
TTATTAACCC CCGCAGCCAC AACCATTAGC CATCAATACC TCACGCCGCT GCTGGGCGGC
GATATGGCAG CCATTCGCGG CATGGCAAAG CATATTCTTG AGTCGAACTC AAAGTGTATC
GACCGGGAGT TTATCGCCGC CCACACTGCG TTTTTCGCAG ATTATGAGCA GAGTGTCCGT
CACACTGATT GGCAACAGAT TGAAGCCCAA TCGGGCTTAG CCAAGGACGA TATTATTCAA
GCCGCCACAG TATTTAGCCA AAGTAAGACG GTGATCAGCT GCTGGGCCAT GGGCATCACT
CAGCATAAAC ATTCGGTCGA TACCATTCGC GAAATCATTA ACTTGCATCT GCTCTGCGGC
CAAATGGGCA AAGCTGGCGC AGGGCTTTGC CCGGTGCGCG GTCACAGCAA TGTGCAGGGT
AACCGCACTA TGGGTATTAA CGAAAAACCT AAAGCCGAGT TTATTGACCG TTTAGAGCAG
TATTTGGGCT GCCAATTACC CCGCGCCGCG GGTCATAACG TGGTAGAGGC CTTAAAGGCC
TTAGATAGTG AGCAAAGCAA AGTGCTAATT TGCCTCGGCG GCAACCTAGC TGCCGCGGCG
CCCGACAGCG CCTTTACCTA TAACGCCATG GGAAAAACGC AGTTAAATGT GCAAATCAGC
ACTAAGCTCA ATCGCAGTCA TTTACAGGTC GGCAAAGATG CGCTGATTTT ACCTTGCCTT
GGGCGCACTG AACTCGATAA GCAAAAACAC GGCATTCAAA AAATCACCGT CGAGGATACC
TTCAGCATGG TGCATGCCTC GACTGGGATG AACGATGCGG TATCGCCACT ATGCCTGTCG
GAAATCGATA TTGTGGCGCG CATGGCGCAC GCTACCTTGG CGGTGAAACC ACCATCAATG
AGTACACCTA ATACCAAATC AATTGACTGG TTAGCCCTAA GGGATGATTA CAGCCTGATC
CGCGATTTGA TTGAGCAAAC CATTGCAGGT TTTGAAGATT ACAATCAAAA AATTAACGTC
CCTGCGGGAT TCCATTTAAC CAATAATGCA GCGCAGCTCG ACTGGCATAC CCAAAGCCAC
AAAGCTGAAT TTAGCGCCTG CGCTTTACCC TACTCCATCC TCGCCGACTG TTCGAGTCAG
GCCCTGACCA GTACGCTGCC AGTGTTGCTG CTACAGAGTC TGCGATCACA CGATCAATAC
AACACCACCA TCTATGGCAT GGATGACAGA TACCGCGGCA TTAAGGGCAA GCGTAATGTG
CTCTTCATGA ACAGTGATGA TGCCAAGGCG CAGGGCTTTA GCGACGGCCA GTTAGTCGAT
ATCCAATCGC TCACTAACGA TGGCAAATTG CGCAAGGTGT ATGACTTTAT GGTGATTTAT
TACGAGATCC CTAAGGGCAA TATCGCCGCC TATTACCCCG AGACCAATCC CTTAGTCGCC
ATCGACAGTG TGGGCGTGGG CTCCTATACC CCGACCTCAA AATCGGTTCC CGTTATCTTA
ACCCCCGCGA GCAGCAATAA AATCAGCATC ACCCAACTGT AA
|
|---|
| Protein sequence | MPVHIEKPTK AGGFPSLQST LKHVLRSQKT QQNIKNLLRV NQTDGFDCPG CAWGDNKAGA
FQFCENGAKA VAWESTGKIV DRDFFAQYSV RQLAKQTDYW LEYQGRLAEP MRYNAATDHY
EPISWDGAFQ LIADTLNGLS DPNQVEFYTS GRASNEASYL YQLFGRLYGT NNFPDCSNMC
HEASGVALNQ AIGVGKGTVV LSDFDAAEAI FVFGQNPGTN HPRMMNALRK AAKLGCKIVT
FNNLKEVALE RFASPQSPTE LLTPAATTIS HQYLTPLLGG DMAAIRGMAK HILESNSKCI
DREFIAAHTA FFADYEQSVR HTDWQQIEAQ SGLAKDDIIQ AATVFSQSKT VISCWAMGIT
QHKHSVDTIR EIINLHLLCG QMGKAGAGLC PVRGHSNVQG NRTMGINEKP KAEFIDRLEQ
YLGCQLPRAA GHNVVEALKA LDSEQSKVLI CLGGNLAAAA PDSAFTYNAM GKTQLNVQIS
TKLNRSHLQV GKDALILPCL GRTELDKQKH GIQKITVEDT FSMVHASTGM NDAVSPLCLS
EIDIVARMAH ATLAVKPPSM STPNTKSIDW LALRDDYSLI RDLIEQTIAG FEDYNQKINV
PAGFHLTNNA AQLDWHTQSH KAEFSACALP YSILADCSSQ ALTSTLPVLL LQSLRSHDQY
NTTIYGMDDR YRGIKGKRNV LFMNSDDAKA QGFSDGQLVD IQSLTNDGKL RKVYDFMVIY
YEIPKGNIAA YYPETNPLVA IDSVGVGSYT PTSKSVPVIL TPASSNKISI TQL
|
|---|
| |