| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1869 |
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| Symbol | |
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| ID | 4477928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2213489 |
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| End bp | 2214628 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639726451 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_869506 |
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| Protein GI | 117920314 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACC TAAAACTACT TTATCAAGGC TTTCGCGACC CCGATACCAT AGCCTCGTTT
GCGGAGGATA TCGCTAAATG CGCCCGCACA CTTAAAGAGC CGATCAATAT CATGGAGGTC
TGTGGCGGCC ATACCCACAC CATCATGAAA TATGGCTTAC TGGATTTACT GCCGGAAAAT
ATTGAATTTA TCCACGGTCC CGGCTGCCCA GTGTGCGTGA TGCCCAAGGA GCGAATTGAC
CAAGCCGCAG TGCTCGCCCA GCAAGAGAAT GTGATTTTAG TAACCCTAGG GGATATGATC
CGCGTGCCAG GATCCCAGGG CTCACTTGCC AGTTTCAGGG CCAAGGGCTG TGATATTCGC
CCTATCTATG ACCCTTTAGA TACGCTAAAA ATCGCCCGCG ATAATCCCGA TAAAATCGTG
GTGTTTTTCG CCATTGGCTT TGAAACCTCG ACCCCTATGA CCGCCGTGCT GCTACAGTTG
GCCGAGCAGG AAAAACTGGC GAATTTGTTG TTTCATATCA ACCACGTCTT AGTACCACCC
GCAATTGATG CTGTGATGCA AGACCCTAAA GCCAGGGTAA ACGCCTTCAT TGGCCCTGCG
CACGTCAGCG TGATCAGTGG TGCCAAAATC TATCGCCCCG CGGTCAAGCA ATACGGTACG
CCTGTGGTGG TTTCGGGGTT CGAACCCGTT GATGTGATGG AGTCCATCCT GCGCATCGTG
CGGCAAAAGG TGGCGGGAAC GGCGCTATTA GATATCCAAT ACAGCCGCGC CGTGTCCGAG
GAAGGTAATC TTGCCGCTCA GGCCAAGGTT AATCAATTTT TCCAGACTCG GCCGCAATTT
CGTTGGCGCG GGCTTGGACC TATTCCCAAC TCGGCGCTTG AGTTAAGACC CGAATACGCC
CACAGGGACG CTGAGAAATA CTTTAAGGAC AGATTACCCG TCAAAGAGAT TGACGATCAT
AAGGCTTGCC AATGCGGCGA TATTCTTCGC GGGCTCGCCA AACCTAAGGA CTGTAAAGTC
TTTGGCCGCG GCTGCAATCC CGAAACCCCT CTCGGTAGCT GTATGGTTAG CTCCGAAGGC
GCGTGTAATG CGTATTACCG CTATCAAGGC ATAGATAGCA AGGAGCCACA CCATGGCTGA
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| Protein sequence | MLDLKLLYQG FRDPDTIASF AEDIAKCART LKEPINIMEV CGGHTHTIMK YGLLDLLPEN
IEFIHGPGCP VCVMPKERID QAAVLAQQEN VILVTLGDMI RVPGSQGSLA SFRAKGCDIR
PIYDPLDTLK IARDNPDKIV VFFAIGFETS TPMTAVLLQL AEQEKLANLL FHINHVLVPP
AIDAVMQDPK ARVNAFIGPA HVSVISGAKI YRPAVKQYGT PVVVSGFEPV DVMESILRIV
RQKVAGTALL DIQYSRAVSE EGNLAAQAKV NQFFQTRPQF RWRGLGPIPN SALELRPEYA
HRDAEKYFKD RLPVKEIDDH KACQCGDILR GLAKPKDCKV FGRGCNPETP LGSCMVSSEG
ACNAYYRYQG IDSKEPHHG
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