| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1861 |
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| Symbol | |
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| ID | 4477920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2202821 |
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| End bp | 2204782 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726443 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_869498 |
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| Protein GI | 117920306 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0473101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAC AACCCGATTT TACCCCTCGT CTGTCGCGAT TTTCCCGCAA AGCCCTCCCC
TTAGCTATCA GCCTCGGCCT CAGTGCTATA TCGGCAACGG CTCTGGCCAA CAATAGCGCC
ACAGGCGAGA TGGAACGTAT GGTGATCACT GCGACGCAAA CCAAACACTC TGAGCTCTCG
GCGCCAGCAT CAGTATCAGT GATTAATCGC ACCGAGCTTG AAGCCTTAGT GATTGATGAC
CTCGCCAGTG CAGTGCGTTA TTTACAGGGA GTGAATATCA GTGAAGGTAC GCCCTATGGC
CGCAATGAAA TCAGCCTTAG GGGTCTGGAT TCTGACTACA CCTTAATCTT GATCAATGGC
CGCCGCGTCA ATTCTCGCGA GGCGCTCACC TCCAACTATG GCAATGACTT CGACCTGTCA
TCTATCCCCA TGTCTGCTAT CGAGCGCATT GAGTTAGTTC GCGGCCCCAT GTCATCCCTC
TATGGCTCCG AAGCCTTAGG TGGCGTAGTC AACGTTATCC TGCGCCAACC AACCGAAACT
TGGCAAACCA GCGTCGGCGT GCAATACGAC ACACCAACCA GTGGTGAAGG TGGCGATAGC
ACTAAATACA ACTTCTACAC AAGCGGCGCA CTCGTGAAGG ATAAACTGCT GGCGAACTTG
ATTGTCGATA GCAATAAACG TGATGCCTGG CGTTCAGACT TAAAGCCAAC TATCGATGCA
CTCGAAGACA GGGATGAGAT CAGCGCCTTA GCCAATCTGC AATGGTTAAT CGACAAGCAG
CAGGATCTGC AATTCGATAT CAGTTACGCC AGCGATGAGC GTGAGTCCGA CTGGAATAAC
TACGGCACGA TTCTGACCAA CAACCAACAG GCGGAGCGCA TTAGCTCAGG TTTGACCCAT
AACGGCCGTT GGGACTGGGG TGATACTCGC CTGCGTTACT ATTATGAAAA TGTCGAAGTA
ACCGATGATT CGGCGCTGAT CGCGCAAATT GGCCATATCA CTCAAACCAA CCACAATCTC
GACGGCCAAA CCACAGTGTT ACTCGGCGAG CATATGCTGA CGGGCGGCGC CGAATACCGT
TGGACCAAGC TTGAGAACAG CCGCAATATT TTAGGCGATG GCACCTTAGA CGACAGTCAG
TCGGCACTGT ATCTGCAGGA TGAGTTCAGT TTAGGCGAAC TGAGTCTCAC CCTCGGTGGC
CGTGTCGATC ACCACGATGT GTATGGCACT GAGTTTAGTC CTCGCCTCTA TCTGGTTTAT
CCACTCAGCT CCGAATGGGT GATCAAAGGT GGCGGTGGTA AAGCCTTTAA AGCACCGAAT
ATGTCGCAGT CCCAAGCCGA TTATATTATC CCAGCCTGTC GTGGTGCCTG CTCTGTGGCG
GGCAATCCCG ACTTACAGCC CGAAACCTCG GTGAACTACG AGCTATCGAC CCAATACCAA
ACCGCAGATT TTGGCGGCTC CGTCACCTAT TTCCATAATG ATGTAGAAAA CAAAATCATC
ACCGAGACCT GGGACAGAAC CCCGGGCGCC GTGCTCACCT ATCAAAACGT TAACGAAGCT
AAGATCACTG GTTGGGAATT ACAGGCATGG TACGACTTAA CCGACAGTTT AAGTATCAGT
GGTAACTACA GTAAAACCGA TGCCAAGGAT AAACAAAATG GCGCGCCTTT TACTTTAACG
CCTGAAGATA GCTACAACCT GAAACTGCAA TGGCAGGCGT TAGAGGGATT ATCCACCTTT
ATTGCTTACC ACTACACGGG TGAACAATAT CTGAGAACCA ACGTTAAATC AGATGGTTAT
GGTTCACTTG ATTTAGGTGT GAATTATCAA ATCAACCCTA TGTTTAGAGT AAAACTAGGG
GTGACTAACT TGACGGATGC CGAGCGCGAT CAAATTGCCA CCGATTTGGA TTACATTCAA
AAGAGCCGCA GCGTGTATGC TGGGGTAACG GCAAGCTTCT AA
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| Protein sequence | MPAQPDFTPR LSRFSRKALP LAISLGLSAI SATALANNSA TGEMERMVIT ATQTKHSELS
APASVSVINR TELEALVIDD LASAVRYLQG VNISEGTPYG RNEISLRGLD SDYTLILING
RRVNSREALT SNYGNDFDLS SIPMSAIERI ELVRGPMSSL YGSEALGGVV NVILRQPTET
WQTSVGVQYD TPTSGEGGDS TKYNFYTSGA LVKDKLLANL IVDSNKRDAW RSDLKPTIDA
LEDRDEISAL ANLQWLIDKQ QDLQFDISYA SDERESDWNN YGTILTNNQQ AERISSGLTH
NGRWDWGDTR LRYYYENVEV TDDSALIAQI GHITQTNHNL DGQTTVLLGE HMLTGGAEYR
WTKLENSRNI LGDGTLDDSQ SALYLQDEFS LGELSLTLGG RVDHHDVYGT EFSPRLYLVY
PLSSEWVIKG GGGKAFKAPN MSQSQADYII PACRGACSVA GNPDLQPETS VNYELSTQYQ
TADFGGSVTY FHNDVENKII TETWDRTPGA VLTYQNVNEA KITGWELQAW YDLTDSLSIS
GNYSKTDAKD KQNGAPFTLT PEDSYNLKLQ WQALEGLSTF IAYHYTGEQY LRTNVKSDGY
GSLDLGVNYQ INPMFRVKLG VTNLTDAERD QIATDLDYIQ KSRSVYAGVT ASF
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