| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1859 |
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| Symbol | |
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| ID | 4477918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2200160 |
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| End bp | 2202184 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726441 |
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| Product | helicase c2 |
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| Protein accession | YP_869496 |
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| Protein GI | 117920304 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.347581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAC CTTGCTCGCC CTTGAATCAC ACCCGACGCC CTGCTATGCG GCAAGCCAAA
CTTCAGCAAT CCAATCAGCA GTCTAGAGAC GCTCAACGTC CGATGAGCCG ATTGGCGAGT
GAAGTGCTGC GCGCTTTTGC CAGCGATGGG GTGCTCGCCA AGCATATTCA AGGGTTTAGT
GCGCGTCAGA GTCAGGTTGA AATGGCGCAA ATCATCAGTG AAGCGATTGC CAGCAAGGGC
AATGCACTGA TTGAAGCGGG CACAGGGGTC GGTAAAACCT TCGCGTATTT AATTCCAGCC
ATCTTAAGTG GCAAGCAAGT GATCGTGAGC ACGGGCAGTA AAAACCTGCA GGAGCAATTA
TTTCTAAAGG ATTTACCCGC GTTGACCTCT ATGCTTGGGA TTGCGCCCAA GCTCGCGCTA
TTGAAAGGTC GCAATAACTA TTTATGCCAA CATCGACTCG ATAAGCAGAT GCAGGAGGCC
AGCCATATTG AGGCGCGATT ATTGGATGAT TTACTCAAAA TCAACCAATG GGCGGGCATG
AGTAAGGATG GCGATATCGG TGGCTTAACT TCTGTTGCCG AAAACTCTCC CGCGCTTCCC
TTAGTGGTCA GTACTAAAGA GACCTGTCTT GGCCAGCGCT GCGAATTTTA TGATGCTTGT
TTTACCCGCA AGGCCCGCGG CCGCGCCATG GACGCAAAAA TCATTGTGGT GAATCATCAC
TTATTCTTTG CCGACAGCGT GTTAAAGGAT ACGGGCTTTG CCGAGCTGTT GCCCGATCCC
GATGTTGTGA TCTTCGATGA GGCGCATTTG TTGCCAGACA TCTGCGTCAG TTACTTTGGG
CAACAATCCT CGAGTCGAAC CATTGATGAT TATCTGCAAA AGTTATTGCA GATTTACCAA
ACTGAGCTCA GCGATACGGG GCAGATAGCT CAATTCTGTC AGCGCTGTTT AACCAAGTTA
AGTGATTGGC ATAATGCATT ATTTTCGAGC GGCGAGTCGG ACTGGCGGCT GCAGCTTGGC
AATAAATCCA TCGCCTTAGC CTCATGGGAT TTATTGGCTG AATTAACCGC ACTGCAAAAG
CTGTTACTTG TACACGTGGG GCGCAGCGAA TTATTGGATG ATATTGCGGT AAAGCTGACT
GAGTTAAACC ATAAACTGAA TCAATTTTTT AATTGCGATA ATCCGCAGGC GGCGTACAGC
GTTGAGTTTG GTAGCCGTTT TGTCATGCTA CGGATGTCAC CCATCAATAT TGCCCGCGAA
TGTCAGCAGC TATTTGTGGC CAATACTAGC TGGATTTTTA CTTCGGCGAC CCTGCAAGTG
AACCGCAGCC TAGACCATTT TGCACAGGAG CTTGGGATAA GCGATGCCAA GGCACATATT
TTAGACAGTC CCTTCGATTA TCCACGTCAG GCTTTATTTT GTGTGCCGAG ACAACTGGGG
AATGTGACGA ATCAGCAGCA AGCACTTAAG CAGTTAGTCG ATGTGTGTGT AAAAGCGATT
GAGGCGGCGC AGGGACGAAC CTTCATTCTG TTTACCAGCC ATAAAATGCT CGAGCAAACC
GCGCTGGCAT TACGCACACG GACTCAATAT CCGTTATTAG TGCAAGGGCA GGCGGGTAAG
CAGAGCCTAC TGACCAAGTT TCGCCAACTG GGAAATGCGG TGTTACTGGG GACGAGCAGT
TTTTGGGAAG GGGTGGACGT TCGCGGCAAG TTATTAAGCT GCGTGATTAT CGATAAGCTA
CCCTTTGTCT CGCCCGATGA GCCGCTTTAC CGTGCTCGCG CCGACAATAT CAGCCGTCAG
GGGGGCGATC CTTTTACTCA AGTGTCGTTA CCTCAAGCGA TTATTGCGCT CAAACAAGGG
GTTGGACGTT TGATCCGTGA CGAAAAGGAC TGCGGCGTAC TCATTCTGTG TGATAATCGT
ATTGTGAATC GCGCCTACGG ACAGGCCTTT TTAAATTCCC TGCCACCGAT GTCCCGCACT
CGAGATTTAG ACCAAGCCCT GCAATTTTTA AGGAAAATCC CTTAA
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| Protein sequence | MKGPCSPLNH TRRPAMRQAK LQQSNQQSRD AQRPMSRLAS EVLRAFASDG VLAKHIQGFS
ARQSQVEMAQ IISEAIASKG NALIEAGTGV GKTFAYLIPA ILSGKQVIVS TGSKNLQEQL
FLKDLPALTS MLGIAPKLAL LKGRNNYLCQ HRLDKQMQEA SHIEARLLDD LLKINQWAGM
SKDGDIGGLT SVAENSPALP LVVSTKETCL GQRCEFYDAC FTRKARGRAM DAKIIVVNHH
LFFADSVLKD TGFAELLPDP DVVIFDEAHL LPDICVSYFG QQSSSRTIDD YLQKLLQIYQ
TELSDTGQIA QFCQRCLTKL SDWHNALFSS GESDWRLQLG NKSIALASWD LLAELTALQK
LLLVHVGRSE LLDDIAVKLT ELNHKLNQFF NCDNPQAAYS VEFGSRFVML RMSPINIARE
CQQLFVANTS WIFTSATLQV NRSLDHFAQE LGISDAKAHI LDSPFDYPRQ ALFCVPRQLG
NVTNQQQALK QLVDVCVKAI EAAQGRTFIL FTSHKMLEQT ALALRTRTQY PLLVQGQAGK
QSLLTKFRQL GNAVLLGTSS FWEGVDVRGK LLSCVIIDKL PFVSPDEPLY RARADNISRQ
GGDPFTQVSL PQAIIALKQG VGRLIRDEKD CGVLILCDNR IVNRAYGQAF LNSLPPMSRT
RDLDQALQFL RKIP
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