Gene Shewana3_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1843 
Symbol 
ID4477902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2183421 
End bp2183771 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content46% 
IMG OID639726425 
Producthypothetical protein 
Protein accessionYP_869480 
Protein GI117920288 
COG category[S] Function unknown 
COG ID[COG3784] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.24244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.447273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA TGCCACTCAA AACCCTGCTA CAAAAGCCAA CATTACTGCT GTTGCTCGGC 
CTGAGTTTAT TCAGCTTAAA TGCCTTTGCC ATGTCATTGC AGGAAGCTAA ATCCCAAGGT
TACTTAGGTG AGCAGCTCAA TGGCTATTTG GGTCTAGTGC AAAATAATAG CGAGGCCAAG
GCCGTGATGG ACGATGTGAA CAACAAACGC CGCGCCCATT ACGAAACCAT CGCTAAAAAG
AACAATATCT CCGCCGCCGA TGTAGCCAAA CTTGCCGGTG AAAAAGCCAT CGCCGCCACA
GATAAAGGCA ACTATGTGCA AAACGCCCAA GGAAAATGGG TTAAAAAATA G
 
Protein sequence
MKSMPLKTLL QKPTLLLLLG LSLFSLNAFA MSLQEAKSQG YLGEQLNGYL GLVQNNSEAK 
AVMDDVNNKR RAHYETIAKK NNISAADVAK LAGEKAIAAT DKGNYVQNAQ GKWVKK