Gene Shewana3_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1838 
Symbol 
ID4477898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2179947 
End bp2180786 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content50% 
IMG OID639726422 
Productputative esterase 
Protein accessionYP_869477 
Protein GI117920285 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.236801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATAG AAAATATCAG CTGTAACAAG AGCTTTGGTG GTTGGCACAA ACAGTATCGC 
CATCAATCTC AGGCGCTGAA TTGCGAGATG CGCTTTGCGA TTTACCTGCC TCCGGAGGCG
GCCAACAAAC CTGTGCCTGT GTTGTATTGG CTATCGGGTC TCACCTGTAC CGACGAAAAC
TTTATGCAGA AGGCGGGCGC GCAGCGTATT GCGGCTCAAT TGGGGATAGC CATCGTTGCC
CCCGATACCA GCCCGCGTGG TGATGATGTT GCCGATGCAC CGGATAAAGC CTATGACTTA
GGCTTAGGCG CGGGGTTTTA TTTGAACGCG ACCAGAGCGC CTTGGAATCG TCACTATAAA
ATGTACGACT ATATAGTGCA TGAATTGCCT GCGCTGATCG AAGCCAATTT CCCCGTGACA
GATCAACGCG CTATCTCTGG CCATTCGATG GGCGGGCATG GCGCGTTAGT GATAGGGTTA
ACCAATCCCC ACAGATACAG TTCAATCTCG GCCTTTAGTC CTATCAGTAA TCCAAGCAAC
GCGCCTTGGG GGATTAAAGC TTTTACCGAG TATTTGGGCG AGAATCGCGA GCACTGGCGC
CAATACGATG CCTGTGAGTT ACTCAAATTG GCGATTAACG AAGTGCCCGT ATTAGTCGAC
CAAGGTGACG CCGACAGCTT TTTAGAGGCG CAACTGATGC CGCAAACGCT CAGTGATATT
GCCAAAGCAA AAGGTTACCC CTTAGATTTG CGTATGCAGG CGGGATACGA CCATAGCTAT
TATTTTATTG CGAGCTTTAT CGAAGAGCAC CTTAAATTCC ATAGCTTGTA TTTTAAATAA
 
Protein sequence
MTIENISCNK SFGGWHKQYR HQSQALNCEM RFAIYLPPEA ANKPVPVLYW LSGLTCTDEN 
FMQKAGAQRI AAQLGIAIVA PDTSPRGDDV ADAPDKAYDL GLGAGFYLNA TRAPWNRHYK
MYDYIVHELP ALIEANFPVT DQRAISGHSM GGHGALVIGL TNPHRYSSIS AFSPISNPSN
APWGIKAFTE YLGENREHWR QYDACELLKL AINEVPVLVD QGDADSFLEA QLMPQTLSDI
AKAKGYPLDL RMQAGYDHSY YFIASFIEEH LKFHSLYFK