Gene Shewana3_1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1837 
Symbol 
ID4477897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2178680 
End bp2179819 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content51% 
IMG OID639726421 
Productalcohol dehydrogenase 
Protein accessionYP_869476 
Protein GI117920284 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID[TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.245686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACG AAAAACCACA GTTTATCAAG TCAAAGGCCG CCGTGGCCTG GGGCCCGGGA 
CAGCCGCTCA AGATTGAAGA AGTCGATGTG ATGTTACCAA AAGCCGGCGA AGTGTTAGTT
CGCATCGTGG CGACTGGGGT TTGCCATACT GATGCGTTTA CCTTAAGTGG TGACGATCCA
GAGGGCGTGT TCCCAGCGAT CCTCGGCCAT GAGGGCGGTG GTATTGTTGA GCAAGTGGGC
GAAGGCGTGA CCAGCGTGCA GGTGGGCGAC CATGTGATCC CTCTCTACAC GCCTGAGTGT
GGTGAATGTA AATTCTGTTT ATCGGGTAAA ACAAACCTGT GCCAGAAGAT CCGTGCAACC
CAAGGCAAAG GTTTGATGCC AGATGGCACC ACGCGTTTCT ATAAAGATGG CCAGCCCATT
TTCCATTACA TGGGTTGTTC TACCTTCTCT GAATACACGG TATTACCTGA AATTTCATTG
GCTAAGGTTA ATAAAACTGC GCCATTAGAA GAAATCTGTT TGCTGGGTTG TGGTGTGACA
ACAGGTATGG GCGCTGTGAT GAACACGGCT AAAGTGGAAG AAGGCGCGAC CGTGGCGATT
TTCGGCCTTG GCGGTATCGG TCTTTCGGCC ATTATTGGTG CGACCATGGC TAAAGCCAGC
CGGATCATTG CCATCGATAT CAATGAATCT AAATTTGAAC TTGCCCGTAA ATTAGGGGCA
ACCGATTGTA TTAACCCGAA ACATTTCGAC AAACCCATTC AAGAGGTGAT TGTCGAAATG
ACCGATGGCG GCGTGGATTA CTCCTTCGAA TGTATCGGTA ATGTCAATGT GATGCGCAGC
GCGCTCGAGT GTTGCCACAA GGGCTGGGGC GAGTCAGTGA TCATTGGGGT TGCGGGCGCA
GGGCAGGAGA TTTCTACCCG TCCATTCCAA CTGGTGACGG GCCGCGTATG GCGTGGTTCT
GCCTTCGGTG GCGTGAAAGG ACGCTCGCAA TTACCTAAAA TCGTTGAACA ATACCTAGCG
GGTGAGTTTA AGCTCGATGA CTTTATCACC CACACTATGG GACTTGAGCA AGTTAACGAA
GCCTTCGACT TGATGCATGA AGGCAAGAGC ATTCGCAGCG TGATCCATTT CGATAAATAA
 
Protein sequence
MSNEKPQFIK SKAAVAWGPG QPLKIEEVDV MLPKAGEVLV RIVATGVCHT DAFTLSGDDP 
EGVFPAILGH EGGGIVEQVG EGVTSVQVGD HVIPLYTPEC GECKFCLSGK TNLCQKIRAT
QGKGLMPDGT TRFYKDGQPI FHYMGCSTFS EYTVLPEISL AKVNKTAPLE EICLLGCGVT
TGMGAVMNTA KVEEGATVAI FGLGGIGLSA IIGATMAKAS RIIAIDINES KFELARKLGA
TDCINPKHFD KPIQEVIVEM TDGGVDYSFE CIGNVNVMRS ALECCHKGWG ESVIIGVAGA
GQEISTRPFQ LVTGRVWRGS AFGGVKGRSQ LPKIVEQYLA GEFKLDDFIT HTMGLEQVNE
AFDLMHEGKS IRSVIHFDK