Gene Shewana3_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1813 
Symbol 
ID4477502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2139735 
End bp2141318 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content44% 
IMG OID639726397 
Productvon Willebrand factor, type A 
Protein accessionYP_869452 
Protein GI117920260 
COG category[R] General function prediction only 
COG ID[COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0321559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGAAC AAAAACCAAC ACAGCTGGCT CCAGCACTTA ATATTTTAGC TGGTTTGGAG 
CGGCAGTTAG TTGATATTGA TTTATTACCT GATTCGTTGG TGCCAGCTGT AGCTACCCTA
CCAGGAGGCG ATTTATCTAC TCGCTGTATG ACTATCGCAT TATTGCGAAA TCAGTTGTTG
GCGGGAGAGT CATTGTCACA ACCTTGTCCT TGGTTACCTG AGGCTGTTCA GCAAAACATT
GTTAATGTAA TTAGCCGTTC AGGTATTGCA ACTTATTGTC AAAATAATCC GCAAGTCACC
GATGCCTTGA TATTGGATTT ACTATCTGCT CTTGAAGGTG CTCAGACAAG AGCATTAATC
CTTGCTAGGC AATTAGCTCA AATCAAATAT AAGCAGGCGT TAGAAGTGCT GAAAGAGGAA
TTCGCCGTTG CCCATATCAA ACGCAATTCA GCCAAACTTA AAAATTTACT TGTTCTTTCA
GATGCAAAAA AACTTGAATG TCAGCTCCAG GCTGAATTAG AGGCCTGGTT GCAGTTAATT
AATGCTAATG GACAACATCC ATTTGCATTG CCATCAGTTT GGGCCGAAAG GTTGGAAGTC
TGGCAAATAC TTTCAGAGAT TTTTGATGAT TTAGGTATGG TCACTGGTCT TGGTTGGGAC
CTATTGAAAG GAATGCTGCA AAGCCATGGT TGGATGAACA TGGTGCGATT ACAGAAGCTG
GTCGAGCAAA TCCCACAATT GCGTGAAGTG ATTGAAACCC TGGGGCGCAT GAAAGATTGC
GACGGTGAGC CCGTGATTGA AGAAATTATC TCTAAGATGA GCGTAACGAA AAGGCGCGAT
AAAGAGATTT CTATGCCGCT TGTGCCAATG GAAACCAAAG GGATTACTCG TTCTGACTCA
ATCAGTCGAA TGTTGCCTCA AGAAGCGGCT TTTTTGGGGC ATCCAGTCCT TAAAAAACTT
TGGCATGCCC GGCGAGCTGA GCATGCATTG CTCAGTTATG CTGTTGAAGG CACGGACGTC
ATCACTGAAG AGGTTACATT TGAGCAAGAG GTTAAGGAAG AAAAATCCGG CTTCAAAATA
AATCGTAACC GTGGTCCCAT GATTGTTTGT CTAGATACTT CCGGTTCCAT GCAAGGAACA
CCAGAGAATG TTGCCAAGGC GCTGGTGTTG CAATGTATCA GTGTGGCTAA AACCGAAAAA
CGTGCTTGTT ATGTTTACCT ATTTGGTAGC TGGGGAGAAG TGACAGAAAT GGAGCTGACA
CCCGATGCTG AGGGCTTAGA GCGGATGATA CTTTTTCTGT CCATGTCATT CGGCGGTGGT
ACAGATGCAG AGGGGCCACT TAATTTGGCT CTTGAGCAAA GTGATAAGAA TAAATGGCAT
CAAGCAGATA TATTGCTCGT TAGCGATGGT AAGTTTGCGG TGTCTTCAGG ACTAACCCGT
AAAATTAGTC ATCGTAAGGA TAATAGCGGA TTGAGTATTC ATGGGATTGT TATTGGGTCG
AGTTTGTCGC CGATGGACAA GATCTGTGAC CCGTTGCATC AGTTTTCAAG TTGGTTAGAC
CTGCAAAATA ACGTATATCA GTGA
 
Protein sequence
MNEQKPTQLA PALNILAGLE RQLVDIDLLP DSLVPAVATL PGGDLSTRCM TIALLRNQLL 
AGESLSQPCP WLPEAVQQNI VNVISRSGIA TYCQNNPQVT DALILDLLSA LEGAQTRALI
LARQLAQIKY KQALEVLKEE FAVAHIKRNS AKLKNLLVLS DAKKLECQLQ AELEAWLQLI
NANGQHPFAL PSVWAERLEV WQILSEIFDD LGMVTGLGWD LLKGMLQSHG WMNMVRLQKL
VEQIPQLREV IETLGRMKDC DGEPVIEEII SKMSVTKRRD KEISMPLVPM ETKGITRSDS
ISRMLPQEAA FLGHPVLKKL WHARRAEHAL LSYAVEGTDV ITEEVTFEQE VKEEKSGFKI
NRNRGPMIVC LDTSGSMQGT PENVAKALVL QCISVAKTEK RACYVYLFGS WGEVTEMELT
PDAEGLERMI LFLSMSFGGG TDAEGPLNLA LEQSDKNKWH QADILLVSDG KFAVSSGLTR
KISHRKDNSG LSIHGIVIGS SLSPMDKICD PLHQFSSWLD LQNNVYQ