| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1811 |
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| Symbol | |
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| ID | 4477500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2136712 |
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| End bp | 2138136 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639726395 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_869450 |
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| Protein GI | 117920258 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.053001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGCC CTATATGGGC GACAGTATCT GATGTGACCT TTGATCGGCT TGAGCTTATT
TACAATTATC CGTCGGACCT AGTTACTCCG TACCTTGAGC TACTCACTGG CAATCTGAGT
TGTCCTGTCA ATGCTCGTAA GGCCGATTTA TCCTCGCCAG TTGATTTCGG AGAAATTTAC
CTCGCTGCAG AACGGTTACT AGACGGTATT AATCGTGAAG CCATTCAACT GTCTGTTTTA
TTGAGTCCGG GTACACCTGC TATGCAGGCT GTGTGGATAT TACTCGGTAA AACTCGATTC
GCCTGCAACT TTTATCAAGC ATCAAAAGAA CAAGGCGTTA ATATTGTAGA AATTCCTTTT
AAGCTGACAG CTGAATATTT TCCTTCGATG ACTAATCTAG CCCCTATTGA ACTTGGGCAA
CTTGGTCTAT TGGGCTTTGA TGCTGATCCC GCTTTTGATG ACATTATTAC CCTTGATCCT
GAAATGTTAC TACTTAAAGC CAAGGCTCAA GTTTTAGCAT CGCATGAAGT ATCTGTGCTG
ATTTGTGGTG AGAGTGGTAC CGGCAAAGAG ATGTTTGCTC GGGCAATTCA TAATGCAAGT
GCGAGAAGGG ACAAACCATT TGTTGCGATC AATTGTGGCG CATTTCCCTC AGAACTTATC
GATTCAATAC TTTTTGGCCA TAAAAAGGGG GCTTTTACTG GTGCGGTTTC AGATAAGGTA
GGAGTTTTTG AATTGGCGCA TTCAGGTACT CTTTTTTTGG ATGAGTTTGG CGAGCTTGAT
AGTTCAGCCC AAGTCAGGCT CCTTAGAGTA TTGCAAGATG GTAAATTCAC TCGCTTGGGA
GATAGTAAAG AACGTAGCAG CAATTTCCAT TTAATCACAG CAACTAATCG AGACTTGATG
GCTGACGTTT CCAAGGGTAG GTTCAGAGAG GATTTATTCT ATAGGGTTGC CATTGGTGTG
TTGTCCTTAC CACCTCTAAG GTCTCGACAA AGCGATTTAG ACCATCTAGC AGATCAGTTT
ACCGCCATGC TCACACAAGA ATACCCTTCT CTAGGTGGTA AAAAAATTTC CACTGCTGCA
AAAAAAATTA TCAGTAATCA TCGTTGGCCT GGAAATATCA GAGAGCTGAA AGCAACGATT
CTTAGGGCAG CCTTATGGTC TGAAACTGCC GTATTGGAAG AAGTTGATAT ACGCAGGGCG
ATACTTTCGA CGTTCCAAAA TAGTGAGAGC ATTCTCGAAA GAGATATATC AAAAGGTGTT
GATATAAATA GTATTATTGA TCTAGTAGAA CGGCACTATT TAGAACGAGG ATTGGCATTT
ACGTCGGGGA ATAAACGTAA AGCGGCGTTG TTACTCGGCT ACAACAATCA CCAAACTTTA
AATAATCGCC TTAAAAAACT CGGTCTAGAA AACGACAATG ACTAA
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| Protein sequence | MTGPIWATVS DVTFDRLELI YNYPSDLVTP YLELLTGNLS CPVNARKADL SSPVDFGEIY
LAAERLLDGI NREAIQLSVL LSPGTPAMQA VWILLGKTRF ACNFYQASKE QGVNIVEIPF
KLTAEYFPSM TNLAPIELGQ LGLLGFDADP AFDDIITLDP EMLLLKAKAQ VLASHEVSVL
ICGESGTGKE MFARAIHNAS ARRDKPFVAI NCGAFPSELI DSILFGHKKG AFTGAVSDKV
GVFELAHSGT LFLDEFGELD SSAQVRLLRV LQDGKFTRLG DSKERSSNFH LITATNRDLM
ADVSKGRFRE DLFYRVAIGV LSLPPLRSRQ SDLDHLADQF TAMLTQEYPS LGGKKISTAA
KKIISNHRWP GNIRELKATI LRAALWSETA VLEEVDIRRA ILSTFQNSES ILERDISKGV
DINSIIDLVE RHYLERGLAF TSGNKRKAAL LLGYNNHQTL NNRLKKLGLE NDND
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