Gene Shewana3_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1808 
Symbol 
ID4477497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2133981 
End bp2134688 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content41% 
IMG OID639726392 
Producthypothetical protein 
Protein accessionYP_869447 
Protein GI117920255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.210053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTG TGAAGCGGAA CTACATGTAC CGGGAAGATG ATGATTTACA GTTTCTTTCT 
CTTTGCACTC ATAAGCAACT GACACCACTT GTTAAATATT TGACTAAAGA CAAAATTGGT
AAACTTAGAA CCACTGAGAC ACTAACGACT AACCCAAGGT TTAAAAAGAA TAAGCATGAC
TTGGCGCTAG TATGGCAAGA GATCTGCGCT GAATTGCAAA CTTTTGGTAA TTCAACAGTG
ATGAATCTTA TTACCGGAAA GGGGGGAACC TATCTCAATT TACTGCAATA TACTGCCCGT
TCAATTGGCT GCTCGGTCAG TGCTAAAGAT AAAGATAGTG CTCTTGCAAT TGAAAAAGCT
ATTGTCGCTA AGGTCATGAA ATTGCAATTG GACAAGATGA CGCAAGCTGA TCGTTCGGCA
TTTGTCGAGA GAATGAGTAA AGATTATCAA TGCAAGATTG ATAATGCGCT TGACTGGAGC
AGCAAAGATT TCGCTATTGT ATCTAGAGTC CTTGCTTCGG CATTTGGTGG TGCAGCGGTT
GGTGCAGCAC TTTTGCCAAG AGTGCTGATG ACATACAGTC CAATGGGTGT ATTGGGTGGG
ATTTTTGGTG TATTTGCCGA TGCCCCAAAT GTTAACGTTA CTTTACCCTG TGTTATTCAT
ATTGCAATGC TCCGAGAACT GCGACGTAAC GATAATCCAT TCAAATAA
 
Protein sequence
MDFVKRNYMY REDDDLQFLS LCTHKQLTPL VKYLTKDKIG KLRTTETLTT NPRFKKNKHD 
LALVWQEICA ELQTFGNSTV MNLITGKGGT YLNLLQYTAR SIGCSVSAKD KDSALAIEKA
IVAKVMKLQL DKMTQADRSA FVERMSKDYQ CKIDNALDWS SKDFAIVSRV LASAFGGAAV
GAALLPRVLM TYSPMGVLGG IFGVFADAPN VNVTLPCVIH IAMLRELRRN DNPFK