Gene Shewana3_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1798 
Symbol 
ID4477487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2126305 
End bp2127027 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content50% 
IMG OID639726382 
Productretinol acyltransferase domain-containing protein 
Protein accessionYP_869437 
Protein GI117920245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.540939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAGAT TTCATCCCGG TGATCACCTG GTCACCAATA TCGATCCGCT TGGCTTAACC 
GAACACCATG GCCTGTATGT TGGCCATGGC AATGTGATTC ACTTATCTAA ACAGGGCATC
ATCGAAGAAA TCGATCTGCA GCAATTTGCT GGTGGCCATA AGATCAGAGT GAAAAAGTCC
AGCCTGTTTC CCCATCAAGC TATTGAGCTT GCACGCAGTC AGCTGGGTCA CAGTCCATAC
GACGTTGCCA CCAACAATTG CGAGCACTTC GTCAACGAAT GCTTAGCGGG GAGCAGCACC
TCCAATCAAG TGAGTAATCT TAGCCACATT GCGCTGCAAG GCTCTGCCAG AGCAGGCTTA
CTGGGGAATG CTGCTTCAAA GCTGGCCACG GGAACTGTCG CAAACGTCGT GTTAGCCTCT
ACCGCCATCA AAATGACCGG TGAATACCTA GGGCTACCCG ATAACGTCAA CACGCTACTA
GGGACACCTG GAGATCTTGT GGCTAAACCT GCCGAATGCC TACTAAAAGG CACCACGCAA
ACTCTAGGTG AAACTTATAC TTGCTTAAGC CAAGGAGAGA TTACCGATGC GGGGATCAAA
CTCGTCACCG GCAGTGTAGA AACTGGCTTA AACACCATGT TGACGACAGC AGAAGTGGGC
ATCAATGGCG TAAAAGCCGG TGCAGAGCTA ATAGTCGATG CATGGCATTG GTTAAGGTCA
TGA
 
Protein sequence
MYRFHPGDHL VTNIDPLGLT EHHGLYVGHG NVIHLSKQGI IEEIDLQQFA GGHKIRVKKS 
SLFPHQAIEL ARSQLGHSPY DVATNNCEHF VNECLAGSST SNQVSNLSHI ALQGSARAGL
LGNAASKLAT GTVANVVLAS TAIKMTGEYL GLPDNVNTLL GTPGDLVAKP AECLLKGTTQ
TLGETYTCLS QGEITDAGIK LVTGSVETGL NTMLTTAEVG INGVKAGAEL IVDAWHWLRS