Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1798 |
Symbol | |
ID | 4477487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2126305 |
End bp | 2127027 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639726382 |
Product | retinol acyltransferase domain-containing protein |
Protein accession | YP_869437 |
Protein GI | 117920245 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.540939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAGAT TTCATCCCGG TGATCACCTG GTCACCAATA TCGATCCGCT TGGCTTAACC GAACACCATG GCCTGTATGT TGGCCATGGC AATGTGATTC ACTTATCTAA ACAGGGCATC ATCGAAGAAA TCGATCTGCA GCAATTTGCT GGTGGCCATA AGATCAGAGT GAAAAAGTCC AGCCTGTTTC CCCATCAAGC TATTGAGCTT GCACGCAGTC AGCTGGGTCA CAGTCCATAC GACGTTGCCA CCAACAATTG CGAGCACTTC GTCAACGAAT GCTTAGCGGG GAGCAGCACC TCCAATCAAG TGAGTAATCT TAGCCACATT GCGCTGCAAG GCTCTGCCAG AGCAGGCTTA CTGGGGAATG CTGCTTCAAA GCTGGCCACG GGAACTGTCG CAAACGTCGT GTTAGCCTCT ACCGCCATCA AAATGACCGG TGAATACCTA GGGCTACCCG ATAACGTCAA CACGCTACTA GGGACACCTG GAGATCTTGT GGCTAAACCT GCCGAATGCC TACTAAAAGG CACCACGCAA ACTCTAGGTG AAACTTATAC TTGCTTAAGC CAAGGAGAGA TTACCGATGC GGGGATCAAA CTCGTCACCG GCAGTGTAGA AACTGGCTTA AACACCATGT TGACGACAGC AGAAGTGGGC ATCAATGGCG TAAAAGCCGG TGCAGAGCTA ATAGTCGATG CATGGCATTG GTTAAGGTCA TGA
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Protein sequence | MYRFHPGDHL VTNIDPLGLT EHHGLYVGHG NVIHLSKQGI IEEIDLQQFA GGHKIRVKKS SLFPHQAIEL ARSQLGHSPY DVATNNCEHF VNECLAGSST SNQVSNLSHI ALQGSARAGL LGNAASKLAT GTVANVVLAS TAIKMTGEYL GLPDNVNTLL GTPGDLVAKP AECLLKGTTQ TLGETYTCLS QGEITDAGIK LVTGSVETGL NTMLTTAEVG INGVKAGAEL IVDAWHWLRS
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