| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1785 |
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| Symbol | |
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| ID | 4478672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2105333 |
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| End bp | 2110177 |
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| Gene Length | 4845 bp |
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| Protein Length | 1614 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726368 |
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| Product | glutamate dehydrogenase (NAD) |
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| Protein accession | YP_869424 |
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| Protein GI | 117920232 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.2049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGA AAGATGCAAT GCCTTCAGTA CTACTTGAAA ATGTAGTCAG TTTAATTCAC
GCTAAAGTCC CTAATTCACA AGCCAAGCAA GTTGAACAGT TCGCGACCTG CCTTTATGCA
CACATGTCGA AAGACGACCT CAATGCGCGT AACGACAGCG ACCTGTATGG TGCGGTTCTC
AGTTTATGGA ATGCACTAAA CAAAACCCCG AAAGGGGAGA CTCACCTCAG AGTATTCAAT
CCAAGTCAGT CAAAGCACGG CTGGCAATCA ACTCATTCGA TCATTGAAGT TATCCAACCT
GACATGCCAT TCCTGGTAGA TTCAGTTGGT ATGGCATTGA ATCGTATGGG TATTACGGCT
CATATGATGT TACACACTCC GCTGGCGATT GAGCGTTCAG CCCAAGACGT AACCAAAGTC
ACTTACCTGA ATCAAAGCCC TGACAGCACT GAACACGTTG CCGTTTTCCT GATTGAAATC
GACCGTCAAA GCAGCAGTGT GGATATCAAA GCCCTTGAGC GTGAAATCCA ATCTGTGCTG
GGTGATGTGG CTGCATCAGT CAACGACTGG AGCGCGATGT CAGCTAAGCT GAGTGAGACC
ATTAAAGAGT TACCTAAGCG TCCATTCCCC GGTGAGAAGC AAGAGTTAGA AGAAGCGATT
AACTTCTTAA CTTATCTTAA TAATCATCAC TTTACCTTAC TGGGTTACCG TCAATACGAT
TTAAAACGTG TTGAAGGCGA CGTCGAGCTA GTGCCGAATA TGGCCTCTAG TTTAGGTCTA
ATGAATAAGC ACCATAAGAC TCAGCCAGAG CAAGGTTTGT TATTATCAAG CTTCTCTGAC
AGCGCCCGTA AAGAAGCCTT AGACCACAGT TTACTGATCC TGACCAAGAG CAGCGCCAAG
AGCCGCGTGC ACCGTCCTGC CTATGTGGAC TATATCGGTA TCAAACGCTT CGACAAGAAA
GGCAATGTGG TCGGTGAAGA CAGATTCATT GGTTTGTACG CCTCAAACGT GTATAACCGC
AGCCCACGTG AGATCCCGCT GCTGAACGAA AAAGTCCAGC GCGTATTAGA CCGTTCAGGT
TTAACGCCAC GTTCTCACGA CTATAAAGCC CTGCTGAACA TTCTCGAAAA CCTGCCGCGC
GATGAGCTAA TTCAAGCCAA TGTGGATGAT TTAGCACACA CGGCGCACGG TGTGCTCGAG
ATGCAAGACA GGGACAAGCT GAAACTCTTT GTTCGCAAAG ATGGTTTCGG TCGTTTCTTA
TCCTGTTTAG TGTACGTTTC AAAAGATCGT TACAACACTA AACTTCGCCA AGATACCCAG
CGTATTCTGG CTCAGCATTT CAACAGCAAA GAAGATGTAG AGTTTACGAC GTATTTCTCC
GAGTCAACCC TGGCCCGTAC TCACTACATT GTCAAAGTTG ATAACAATAA TATGGATGTA
GATGTGGCTG CCATTGAAAA CAATTTAATT GAAGCGGCAC GCTCGTGGGA AGATAAGTTA
AATACCGCGC TAAACACTGC CTTAGGTGAA GAAGCCGGTA CTCATCTGAT GAAGCGTTAC
GCTAACGCCT TCGAACAAAG CTATAAAGAA GACGTATTAC CAAGCTCTGC CGTTGTGGAT
ATGCAACAGC TTGAAGCGCT GGATGACGAA CACAAGTTAG GCATGTTGTT CTATCAACCG
CAGGAAGCGG CGTTGAACGA CAACAAAGTG CGTTTAAAAC TGTTCCATAA AGATGAGCCA
ATCCATCTTT CTGACGTACT GCCGATGCTG GAAAACTTTG GTCTGCGCGT GATCAACGAG
CGCCCATACG AAGTGACGAC TTCAGACGGT TCTACCTTCT GGATCTTAGA CTTCTTAATG
ACGGTTAAAG TCACTAATAC TGACAATATC GCAGACAGCC AAGACAGATT CCAAACTGCA
CTCTCTCAAG TGTGGCAAAA GAAATTAGAA GATGACGGCT TTAACCGCAT CATTCTAGCG
TCAGGTTTAA CTGGCCGTGA AGTGTCAGTA CTGCGTGCTT ACGCTAAGTA CATGCGTCAA
ATCGATGCGA CATTCAGCCA AGCTTATATC GAAGAAACCT TCGGCCGTTA CCCACAAATC
GCTGATTTGT TGGTGAAAAT GTTTATCCGT AAGTTCAATC CAAAACTGAA GACCCGTACT
CTGGGCAAGT TTATGGAGCA GATCAACCTA CGTTTAGACG AAGTATCGAG CCTAGATGAT
GACCGTATTA TCCGTCGTTA CCTCGATCTG ATTAATGCAA CGCTGCGTAC CAACTTCTAC
CAACTGGATG CCAAAGGCGA ATCTAAGAGT TATATCTCGT TTAAATTCAT GCCTTCGTTA
ATTCCAGAAA TGCCGCGCCC GCTGCCGAAA TTCGAAATTT TCGTTTATTC GCCACGGGTT
GAAGGTGTGC ATTTACGTTA CGGTAAAGTG GCTCGTGGTG GTCTGCGTTG GTCTGACCGT
CGTGAAGACT TCCGTACTGA AGTGCTTGGC TTAGTAAAAG CACAACAAGT GAAGAACACC
GTAATCGTAC CTGTGGGCGC GAAAGGTGGT TTCGTTTGTA AACAGCTGCC AACTGAAGGT
GGCCGCGAAG CCTTCTTCAC CGAAGGTCAA GAATGTTACC GCATCTTTAT CCGTGCGCTG
CTCGATATCA CTGATAACAT CGTTAACGGC GAAATCGTTC ATCCGGTGGA TGTGGTCCGT
CACGATGAAG ATGACCCATA TTTAGTGGTC GCGGCAGACA AAGGTACTGC AACCTTCTCG
GATATCGCTA ACGCCATTTC GCAGGAATAC AACTTCTGGT TAGGCGATGC GTTCGCGTCG
GGCGGTAGTA ACGGTTACGA CCATAAGAAA ATGGGTATCA CGGCCAGAGG TGGTTGGGAA
TCGGTTAAGC GTCACTTCCG CGAAGTGGGT ATCGATTGTC AAACCACAGA CTTTAGCTGT
TTAGGTATTG GTGACATGGC GGGTGACGTA TTCGGTAACG GTATGTTGTT GTCTAAGCAC
ACAAAACTTG TGGCTGCGTT CAACCACATG CATATCTTTG TCGACCCGAA TCCAGATACT
GCAGCCAGCT ATGAAGAACG TGCCCGTTTA TTTGCACTGC CACGTTCAAC CTGGGAAGAC
TACAACAGCA AGCTGATTTC TAAGGGCGGC GGTATCTTCC TGCGTTCATC TAAGTCAATT
CCATTGTCTG CTGAAATGAA GCAAATGCTG GAAACGGAAA AGACCTCGAT GACCCCGACT
GAACTGATGA AAGAACTGCT GAAAATGCCA GTGGATCTGA TTTGGAACGG TGGTATCGGT
ACTTATGTTA AGTCATCACG CGAAACTCAT GCTGAAGTGG GCGACCGCGC TAACGATGCA
CTGCGTGTCA ATGGCCGCGA ACTGCGCGCC AAGATCGTGG GCGAGGGTGG TAACTTAGGT
TGTACTCAGT TAGGTCGTAT CGAATACGCA GCTAACGGCG GTCGTATCAA CACTGACTTC
GTGGATAACG TGGGTGGTGT GGACTGTTCT GACAACGAAG TTAACATCAA AATTCTATTA
AACGCGTTAG TGGCTGAGGG TGAACTGACA CTCAAGCAAC GTAACCGTTT ACTGGAAGAG
ATGACTGAAG AAGTCGGCCA AATCGTACTG CAGGATTGTA AAGATCAAAC CCGTACGATT
TCGGTCACCC AAGTCCGTGG TGCTGAGCAG TTAAAAGAAC AAATTCGCTT TATCCAGTAT
CTGGAAAAAG AAGGCAAGTT AGACCGCGCC TTAGAATTCT TACCGTCGGA AGAAGAGCTG
GCAGAACGTT TAGCCAATGG CCGCGCCTTA ACGCGTCCTG AGCTATCGGT GCTGGTAGCG
TACGCTAAGA TGGTACTGAA AGAGCAGTTA CTGACTCAAG AAATCACCGA AGACACGCTG
CTGAGCCAAC TGTTGATTGC TTACTTCCCG AAACAACTTC AGGAACTGTA CAGCCACAGA
ATGGTGACGC ACCCACTGCG CGGTGAAATC ATCGCCACGT CACTGGCCAA CGAATTGGTC
AACGACATGG GTCTGAACTT TGTTCAACGT ATGCAAGATG AGACTGGTGC CTCAGTTGCC
GACGCGGCAA TTTGTTACAC TATGGCTCGC GAAGTGTTTG GTTTAGCTGA ATTAACTAAA
GCGATCACTG ACTTAAACGG TATTGTTCCT GCTGTGGTTC AGGGCGAAAT GCTGCATCAA
TTACGTCGCA ACATGCGCCG TGCATGCCGC TGGTTCCTGC GTCACCGCAA CCGTACTTGG
AGCATCGAGC AAACTGTAGC CTTCTTCAAA CCTGTATTTG AACAAATCAA AGCGAATGTT
CATTCTTACT TGGTAGAAGA AGAAGCGGCG GGTATCCAAG CTGAGATCAA CGCTCTTATC
AAAGAGAATG TGCCTCAGGA AGTGGCAACC GTCGTGGCTA ACATGAGCAC GCTGTTCTCG
GCGCTGGATA TTGCGCAAAT TGCCCAAGCC GAAGAGAAAA CAGTTGAGCT CGTTGCCGAG
ACATATTTCA AACTCGGTGC CCGCGTTGAG CTGCACTGGT TCCTAGAGCA GATCAGTGCA
CAGCCTGTGG CAAACCATTG GCAAGCACTG GCTCGTGCAG CCTTTAGGGA AGAGTTGGAT
TGGCAACAAC GTGCGTTGAC GTCAGTGGTC TTAAGAACAT GCAGTGAAAC CTGTGACGCC
CAGAGCGTTA TTTCTCAGTG GATTGATACC AATCAAGCCC TACTGGAAAG ATGGTTCCAT
ATGCTCGCTG ACTTCAAAAC GTCGCAAAGC CATGAGTTTG CTAAGTTCTC TGTCGCCCTG
CGTGAACTGA ACCTTCTGAT CCTTCATTGC GAAGGCCATA AGTAA
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| Protein sequence | MALKDAMPSV LLENVVSLIH AKVPNSQAKQ VEQFATCLYA HMSKDDLNAR NDSDLYGAVL
SLWNALNKTP KGETHLRVFN PSQSKHGWQS THSIIEVIQP DMPFLVDSVG MALNRMGITA
HMMLHTPLAI ERSAQDVTKV TYLNQSPDST EHVAVFLIEI DRQSSSVDIK ALEREIQSVL
GDVAASVNDW SAMSAKLSET IKELPKRPFP GEKQELEEAI NFLTYLNNHH FTLLGYRQYD
LKRVEGDVEL VPNMASSLGL MNKHHKTQPE QGLLLSSFSD SARKEALDHS LLILTKSSAK
SRVHRPAYVD YIGIKRFDKK GNVVGEDRFI GLYASNVYNR SPREIPLLNE KVQRVLDRSG
LTPRSHDYKA LLNILENLPR DELIQANVDD LAHTAHGVLE MQDRDKLKLF VRKDGFGRFL
SCLVYVSKDR YNTKLRQDTQ RILAQHFNSK EDVEFTTYFS ESTLARTHYI VKVDNNNMDV
DVAAIENNLI EAARSWEDKL NTALNTALGE EAGTHLMKRY ANAFEQSYKE DVLPSSAVVD
MQQLEALDDE HKLGMLFYQP QEAALNDNKV RLKLFHKDEP IHLSDVLPML ENFGLRVINE
RPYEVTTSDG STFWILDFLM TVKVTNTDNI ADSQDRFQTA LSQVWQKKLE DDGFNRIILA
SGLTGREVSV LRAYAKYMRQ IDATFSQAYI EETFGRYPQI ADLLVKMFIR KFNPKLKTRT
LGKFMEQINL RLDEVSSLDD DRIIRRYLDL INATLRTNFY QLDAKGESKS YISFKFMPSL
IPEMPRPLPK FEIFVYSPRV EGVHLRYGKV ARGGLRWSDR REDFRTEVLG LVKAQQVKNT
VIVPVGAKGG FVCKQLPTEG GREAFFTEGQ ECYRIFIRAL LDITDNIVNG EIVHPVDVVR
HDEDDPYLVV AADKGTATFS DIANAISQEY NFWLGDAFAS GGSNGYDHKK MGITARGGWE
SVKRHFREVG IDCQTTDFSC LGIGDMAGDV FGNGMLLSKH TKLVAAFNHM HIFVDPNPDT
AASYEERARL FALPRSTWED YNSKLISKGG GIFLRSSKSI PLSAEMKQML ETEKTSMTPT
ELMKELLKMP VDLIWNGGIG TYVKSSRETH AEVGDRANDA LRVNGRELRA KIVGEGGNLG
CTQLGRIEYA ANGGRINTDF VDNVGGVDCS DNEVNIKILL NALVAEGELT LKQRNRLLEE
MTEEVGQIVL QDCKDQTRTI SVTQVRGAEQ LKEQIRFIQY LEKEGKLDRA LEFLPSEEEL
AERLANGRAL TRPELSVLVA YAKMVLKEQL LTQEITEDTL LSQLLIAYFP KQLQELYSHR
MVTHPLRGEI IATSLANELV NDMGLNFVQR MQDETGASVA DAAICYTMAR EVFGLAELTK
AITDLNGIVP AVVQGEMLHQ LRRNMRRACR WFLRHRNRTW SIEQTVAFFK PVFEQIKANV
HSYLVEEEAA GIQAEINALI KENVPQEVAT VVANMSTLFS ALDIAQIAQA EEKTVELVAE
TYFKLGARVE LHWFLEQISA QPVANHWQAL ARAAFREELD WQQRALTSVV LRTCSETCDA
QSVISQWIDT NQALLERWFH MLADFKTSQS HEFAKFSVAL RELNLLILHC EGHK
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