| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1778 |
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| Symbol | |
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| ID | 4478665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2092479 |
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| End bp | 2094530 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726361 |
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| Product | carboxy-terminal protease |
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| Protein accession | YP_869417 |
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| Protein GI | 117920225 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0159186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAC TCACTTTGGC TACATCCATT GCCACTGTTT TTGTCGGATT CTCGGCTTGG
GCTGTACCAC CCACGATTCA AATCAGCGAG TTACCCACTC TCAAGCAGGA AGCGCAGCAT
AAAGTGGCGA GTAAGCGAGT GACGGATTTA TACACTCGTT CCCACTATCA CAGATTCGCC
TTAGACGATG CGTTTTCGGC GCAGATCTTC GACCGTTACC TGCAACAACT CGATTACCGT
CGTAATGTGC TGACGCAAGC CGATGTCGAC AGTTTTAAGC CTTATACCAA TCAATTCGAT
GATATGTTGA GTTCGGGCGA TCTTGATCCT GCCTACAAGA TGTTTGATTT GGTGCAAAAG
CGCCGCTACG AAGGCTTTGT GTACGCGCTT TCTCTGCTCG ATAAAGAGAT GGATTTCACC
GTGCCAGGTG ATGCCTACGA GTACGACAGA GAAGATGCGG CTTGGCCGAA AGATCAAGCC
GAGATCAACG AGTTGTGGCG CCAACGTGTT AAATACGATG CGTTGAATCT GAAACTCACA
GGCAAGAAAT GGCCTGAGAT CGTCGATATT CTGCAAAAGC GTTATAACAA CGCCATCAAA
CGTCTGACCC AGACCAATAG CGAAGATGTG TTCCAAGCGG TGATGAATGC ATTTTCTCGC
AGCATCGAGC CACACACTAG CTATTTATCG CCCCGTAATG CTGAGCGTTT CCAAATGGAA
ATGAACTTAA GCCTCGAAGG TATTGGTGCG CAGTTACAGC TCGAAGACGA TTACACTGTC
ATCAAGAGTT TGATTGCAGG TGGTCCTGCG GCCAGCAGTG AAAAACTGTC GCCGGAAGAT
AAGATTGTCG GTGTCGGCCA AGAAGGCGGT GAGATTGTTG ATGTGATCGG CTGGCGATTA
GACGATGTGG TCGATCTGAT TAAAGGCCCT AAGGGCAGTA AAGTTATATT ACAGATTTTA
CCTAAGAAGG GCGGTTCTAA CGCTAAGCCG TTCAATCTGA CCTTAGTGCG CGACAAAATC
CGTCTAGAAG ACCGTGCCGC GACCTCAAAG ATCATCGAGC CAAAAGACGG TGAATACGCC
AACCGTAAAG TGGGTGTGAT TCAAATTCCT GGTTTCTATA TGAATTTATC CCAGGATGTC
GAAAAAGAAT TGGTGAAGTT AAACGAAGCC AAGGTTGAAG GTGTCGTTAT CGACTTACGT
GGTAATGGCG GCGGTGCGTT AACCGAAGCC GTATTACTGA CCGGACTCTT TATCGATATG
GGCCCTGTAG TGCAAGTGCG TGACGCCGAT GGTCGAGTGT CTGCCCACCG TGATAACGAT
GGCAAGACGA CGTATGCTGG TCCGTTAACC ATTATGGTTG ACCGTTACAG TGCATCAGCC
TCTGAGATTT TTGCCGCTGC CTTGCAAGAT TATGACCGTG CGCTGATTGT CGGTGAGTCT
AGCTTTGGTA AAGGCACTGT GCAGCAGCAT AAGAGCCTGG GTCGTATCTA CGATATGTAC
GAGAAGCCAA TTGGCCATGT GCAGTATACG ATTCAAAAGT TCTACCGTAT CAACGGTGGT
AGTACGCAGC TTAAGGGCGT AACCCCGAAC ATTGCTTACC CAAGTGCGTT AGAGCCGGGT
GAATACGGTG AAGCGGAAGA GAAGAATGCT CTACCTTGGG ACAAAGTGCC GATGGCGCAA
TACGGTACGC TAAACGACAT CACTCCTGAG TTAGTGGCGA GTTTAGAGAA AAAACACCTT
GCCCGTATTC AGAACGATGT TGAGTTTAAC TATATCAATC AAGATATTGC CGACTTTAAA
AAGCATCATA AAGAGAAAAC TGTCTCCTTA GTTGAAAGTG AGCGTATTGC CTCACGTGAA
GCCGATGAGA AGAAAGTCCT CGATAGAACC AACGAGCGTC GTGTTGCCCA TGGTTTAGCC
GCGGTTAAAT CGATGGAAGA CATTAAAGAC AAAGACGATG TTGAAGCACC GGATGCCTTC
TTAGACGAAA CGGCCTATAT CACCTTAGAT ATGGCGGATG CAAAAAAGCT GGCTAACGCT
GGCACTAAAT AG
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| Protein sequence | MRKLTLATSI ATVFVGFSAW AVPPTIQISE LPTLKQEAQH KVASKRVTDL YTRSHYHRFA
LDDAFSAQIF DRYLQQLDYR RNVLTQADVD SFKPYTNQFD DMLSSGDLDP AYKMFDLVQK
RRYEGFVYAL SLLDKEMDFT VPGDAYEYDR EDAAWPKDQA EINELWRQRV KYDALNLKLT
GKKWPEIVDI LQKRYNNAIK RLTQTNSEDV FQAVMNAFSR SIEPHTSYLS PRNAERFQME
MNLSLEGIGA QLQLEDDYTV IKSLIAGGPA ASSEKLSPED KIVGVGQEGG EIVDVIGWRL
DDVVDLIKGP KGSKVILQIL PKKGGSNAKP FNLTLVRDKI RLEDRAATSK IIEPKDGEYA
NRKVGVIQIP GFYMNLSQDV EKELVKLNEA KVEGVVIDLR GNGGGALTEA VLLTGLFIDM
GPVVQVRDAD GRVSAHRDND GKTTYAGPLT IMVDRYSASA SEIFAAALQD YDRALIVGES
SFGKGTVQQH KSLGRIYDMY EKPIGHVQYT IQKFYRINGG STQLKGVTPN IAYPSALEPG
EYGEAEEKNA LPWDKVPMAQ YGTLNDITPE LVASLEKKHL ARIQNDVEFN YINQDIADFK
KHHKEKTVSL VESERIASRE ADEKKVLDRT NERRVAHGLA AVKSMEDIKD KDDVEAPDAF
LDETAYITLD MADAKKLANA GTK
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