| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1777 |
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| Symbol | |
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| ID | 4478664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2091806 |
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| End bp | 2092450 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639726360 |
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| Product | putative solute/DNA competence effector |
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| Protein accession | YP_869416 |
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| Protein GI | 117920224 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.205752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.103228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAT CAACAGATAA GTTGACCGAC ACCAACGCAA TTTTGGCGTA TTTGTATGAA
ACATTTCCTT TGTGCTTTAT TGCTGAAGGT GAAACTAAGC CATTAAAAAT CGGATTGTTT
CAAGATTTGG CTGAAAGGTT GGCTGATGAT TCTAAAGTCA GTAAAACTCA ACTGCGAGTT
GCCTTAAGAC GCTACACCAG CAGCTGGCGC TACCTGAAAT CGGTAAAAGC CGGTGCACAG
CGTGTAGACC TCGACGGTCA ACCATGCGGT GAGTTAGAGC AAGAGCATAT CGATCATGCT
CAAGCGATGT TGAAAGAAAG CCAAGATAAA GCCAAAGCTA AGCGTGCTGC TCAAGCACCT
AAAGCGGCGC CTGCTGGCAA AGCGCCTGCG AAGAAAGCCC CTAAGAAAGT GGCTGTACCT
GCACGTAAGA CTGAGCGCCC AGCAAAAGCA GCCCCTAAGG CTGAGCCTGC GGTTAACTTA
GTGCAAGCGC AATTGACCGA TCTAACCAAG AAGCAACGTG TCAATGTTAA GTTAGGTATG
ACGCCAGTAG CCGGCGTGAT CACCGATATT AACAAAGAGG ACATTCATGT TCAGCTGGAT
AGCGGCTTAA CGGTAAAAGT GAAAGCGGAA CATATCCTGC TGTAA
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| Protein sequence | MMESTDKLTD TNAILAYLYE TFPLCFIAEG ETKPLKIGLF QDLAERLADD SKVSKTQLRV
ALRRYTSSWR YLKSVKAGAQ RVDLDGQPCG ELEQEHIDHA QAMLKESQDK AKAKRAAQAP
KAAPAGKAPA KKAPKKVAVP ARKTERPAKA APKAEPAVNL VQAQLTDLTK KQRVNVKLGM
TPVAGVITDI NKEDIHVQLD SGLTVKVKAE HILL
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