Gene Shewana3_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1774 
Symbol 
ID4478661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2089915 
End bp2090550 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content49% 
IMG OID639726357 
Productparaquat-inducible protein A 
Protein accessionYP_869413 
Protein GI117920221 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.233291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.160696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAA ATACAGCAGA AAACTCTGTA ATCCTCTGTC GTTCCTGCGA CTTGGCCATT 
CGAAAGCGCG CCCTACCTAC GGGTGTTAGG GCGTTGTGCC CGCGCTGCAG TACCGCACTT
TATGACACAC CATACTGCTC TGTAAACGGC ATGTTGGCGC TGTGCATTAC CGCGCTGGTG
TTCTATTTCC CCGCCAATTT TTTCCCTGTA CTCGAAATCC ACTTTTTGGG CAGTATTCGC
ACCACAACAG TGTTTCAGGG CGCCTTTGCG GTGTTCGACC AAGGTTATTG GGTCGTGGGA
CTAGCCGTGC TCGCCGCCGC CGTGATTGGT CCGGGTTTAT TGATCCTATC GATCCTCAGC
CAGATTTTGA TTGTCAAATG GGGACTTGGT AGCCCCTTTT GGCGTCGCAG CCTCAAACAG
TTATTAAAAC TTCAAGGGCT GCTATCCCAG CTGACTATGC TGGAGATTTA TGTGATTAGC
TTTCTGGTTT CTTCATTTCA ATTATCTGAT TTTTCTGATA TTTACTTCGG AATGGGCACC
TTTTGCTTCA CTATGCTTTT TTTAGTCACC CTGTTCTTAC AGCGGGAATA CGATATTGAG
CATATGTGGA GTCTACTGAT GCAGGGGCGC CGCTAA
 
Protein sequence
MHENTAENSV ILCRSCDLAI RKRALPTGVR ALCPRCSTAL YDTPYCSVNG MLALCITALV 
FYFPANFFPV LEIHFLGSIR TTTVFQGAFA VFDQGYWVVG LAVLAAAVIG PGLLILSILS
QILIVKWGLG SPFWRRSLKQ LLKLQGLLSQ LTMLEIYVIS FLVSSFQLSD FSDIYFGMGT
FCFTMLFLVT LFLQREYDIE HMWSLLMQGR R