| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1766 |
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| Symbol | tmk |
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| ID | 4478653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2080273 |
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| End bp | 2080902 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639726349 |
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| Product | thymidylate kinase |
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| Protein accession | YP_869405 |
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| Protein GI | 117920213 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0776889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCAAG CATCCGCCAA ATTCATTGTT GTTGAAGGAC TGGAAGGCGC AGGCAAATCG
AGTGCGATTG CCCTTATTCG CGATTTTATT GAAAAACATA CCGGCCTTGC ACCCGTGTGT
ACCCGCGAGC CAGGCGGTAC GCCGCTGGCC GAGCGCATTC GTGACTTAGT GAAAATTGCT
GACCCAAGCG ATCCTCTGTG TGATGAGTCC GAATGTTTAT TGATCTACGC CGCTAGAGCC
CAGCTCGTCG CCAATGTGAT CAAACCCGCG CTGGCAGAAG GCAAGTGGGT GTTAGGGGAT
AGACACAATC TTTCATCCTT AGCTTACCAA GGCGGTGGAC GCGGCTTAAT GCCCTTAGTC
GAAGCCGTGA GTAACGCGAC ACTTAAAGGC TTTAAACCTG ATTTAACCCT CTATCTTGAC
CTTGATCCAA AGCTTGGGTT GCTGCGCGCA GCAAAGCGGG GCGAGCTTGA TAGGATCGAG
CAACAAGCCA TCGACTTTTT TGAACGGGCG CGCGCAACTT ACCTCAAGCT TGCCAGCGAA
GATGAGCGGA TTGTTGTCAT CGACGCCAGC CAAACCATGG CCGAAGTGCA TAAAGATATT
CTGGCCGTGT TACAGGCGAT GGCATGGTAG
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| Protein sequence | MTQASAKFIV VEGLEGAGKS SAIALIRDFI EKHTGLAPVC TREPGGTPLA ERIRDLVKIA
DPSDPLCDES ECLLIYAARA QLVANVIKPA LAEGKWVLGD RHNLSSLAYQ GGGRGLMPLV
EAVSNATLKG FKPDLTLYLD LDPKLGLLRA AKRGELDRIE QQAIDFFERA RATYLKLASE
DERIVVIDAS QTMAEVHKDI LAVLQAMAW
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