Gene Shewana3_1759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1759 
Symbol 
ID4478646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2072546 
End bp2073502 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content51% 
IMG OID639726342 
Producthypothetical protein 
Protein accessionYP_869398 
Protein GI117920206 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00915167 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAATA TCATTGAGCA GCTGTTGTTT TCTGCTTCAA TAACCGGTCC CATCTGTTTA 
ATGTTAGCCT TAGGCGTGAT GCTTAAACGC ACCCAAGTGA TTGATGAGCA CTTTATTGAT
GTCGCCTCTA AGCTGGTTTT TAATGTCACC CTGCCCGCGC TGTTGTTCCT CAGCATCATC
AGCTCGCATC ACGATCTTGC CGCCAGTGCG CCATTAATCG GTTATGGCTT ATTAGCCAAC
TTACTGTTTT TTATCCTCTC GACCTACGCG ACGAAACGAT TTTTCCCCGA GCCGAAGGAT
CAAGGCGTCA TCATTCAAGG GGGATTTAGA GCCAATACCG CCATTATCGG CTTAGCCTAT
GTCTCGAATG CCTACGGCGA ATCGGGCGTT GCCTTAGCGG CCGTTTATGT GGCGTCCATG
ACGCTGCTCT ACAATATTCA AGCCGTAATT TGTTTAAGCC CACGGGGAGA GGAGTCGAGC
CGCCGCGCCT TTGCGGTGAT CATTAAAACC ATCACTAAAA ACCCGCTGAT CATTGCCATT
ATGCTCGGCA TGCTGTTTTA TCTGCTGGCG ATCCCTGTAC CGAAAATGGT CCTCGATGCC
GGACAATACT TTGCCAATAT GACGCTGCCC TTAGCACTGC TGTGCACCGG CGGCTCACTG
GATATTGGCT CGCTCAGGCA TGAAAAGTAT TCCACTTGGT TCTCGACCGC CTTAAAACTG
GTGTTTGCTC CACTATTTAT CACCCTTGGA GCCTTGATAC TTGGCTATCG CGGTGTGGAA
CTAGCCTTAG TGTTTTTGAT GAGCGCCGCG CCCACGGCGG CCGCAAGTTA TGTGATGGCG
CGGGCCATGG GGGGAAATGC CACCCTAGCC GCCAATATTA TCGCCCTCAC CACAGTTTGC
TCACTGCTCA CCTGCACCTT AGGCATTTTT ATTCTATCGA CCCTAGGGCT GATTTAA
 
Protein sequence
MGNIIEQLLF SASITGPICL MLALGVMLKR TQVIDEHFID VASKLVFNVT LPALLFLSII 
SSHHDLAASA PLIGYGLLAN LLFFILSTYA TKRFFPEPKD QGVIIQGGFR ANTAIIGLAY
VSNAYGESGV ALAAVYVASM TLLYNIQAVI CLSPRGEESS RRAFAVIIKT ITKNPLIIAI
MLGMLFYLLA IPVPKMVLDA GQYFANMTLP LALLCTGGSL DIGSLRHEKY STWFSTALKL
VFAPLFITLG ALILGYRGVE LALVFLMSAA PTAAASYVMA RAMGGNATLA ANIIALTTVC
SLLTCTLGIF ILSTLGLI