Gene Shewana3_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1748 
Symbol 
ID4479581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2062158 
End bp2062649 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content49% 
IMG OID639726331 
ProductNUDIX hydrolase 
Protein accessionYP_869387 
Protein GI117920195 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGAAA AACTCAGATA CAAACCCAAT GTGACTGTGG CCTGTATTAT CCACGCTCCT 
ACCGAAGATA AGTATCTGTT GGTAGAAGAG TGGATTGATG GCGAGCAGCG CTTTAACCAG
CCCGCCGGAC ATTTAGAAGC GAATGAGAGT CTGATCCAGG CCTGTAAACG TGAAGTGTTC
GAAGAAACTG GGCTTACTCT TGAGCCGCAG GGTTTAGTGG GGATTTATCA GTTTAGTGCC
AGTGAAGCCC TCGCTTTTGT GCGCTTTACC TTTTTTGTAC AAGTCGATGC GCTGCTCCCA
CCTCAGCCAC AGGATGGGGA TATTGATGCC GCCCATTGGC TGAGCTTTGA GCAAATCGAG
GCCAAAACGC AACAACTTCG TAGCCCATTA GTGCTCGATT GCCTTAAGGA TTACCGCCAT
CAGCAGCAAC AGGGGCAAAC CTATTCCCTC GAATTACTCA ATAGTCAGCG TCTGACGGGA
TGTCAAAGAT AG
 
Protein sequence
MAEKLRYKPN VTVACIIHAP TEDKYLLVEE WIDGEQRFNQ PAGHLEANES LIQACKREVF 
EETGLTLEPQ GLVGIYQFSA SEALAFVRFT FFVQVDALLP PQPQDGDIDA AHWLSFEQIE
AKTQQLRSPL VLDCLKDYRH QQQQGQTYSL ELLNSQRLTG CQR