| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1747 |
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| Symbol | mnmA |
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| ID | 4479580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2060818 |
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| End bp | 2061936 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726330 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_869386 |
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| Protein GI | 117920194 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAA TCGAACCCAC TCATACAGGA AAAAAAGTCA TTGTCGGCAT GTCCGGCGGT
GTTGATTCAT CTGTTTCAGC CTATTTGCTT ATGCAGCAAG GCTATCAGGT TGAAGGCCTT
TTCATGAAGA ACTGGGAAGA AGATGACAAC GACGAGTATT GCGCGGCCGC CGAAGATTTA
AAGGATGCTC AAGCCGTTTG CGACAAGCTT GGGATCAAAC TGCACACGGT CAACTTTGCC
GCCGAATATT GGGACAATGT GTTCGAGTAT TTCCTCGCCG AATACAAGGC GGGTCGTACC
CCTAACCCCG ACATCATGTG CAACAAAGAA ATCAAATTTA AAGCCTTTTT AGACTTTGCC
GACGATATCC TCGATGCCGA CTACATCGCC ATGGGTCACT ATGTGCGCCG CCGCGATAAT
GCCGATGGCA CCACGCAAAT GCTACGCGGT GTCGATAACA ACAAGGATCA GAGCTACTTC
CTGTATACCT TAAGCCATGA ACAAGTGGCG CGGAGCCTGT TCCCCGTCGG TGAACTCGAA
AAGCACGAAG TGCGTGAAAT CGCTAAGAAA ATGGGCTTAA TTACCCATGA TAAGAAGGAC
AGCACCGGCA TTTGCTTTAT CGGTGAACGT AAATTCACTG AGTTCTTAGG TAATTACTTA
CCGGCGCAAC CTGGCAATAT CGAAACCGCC GAAGGCGAAA TCATTGGCAA GCACCAAGGC
TTGATGTACC AGACCTTAGG TCAACGTAAA GGTCTGGGCA TTGGCGGCAT GAAAAACAGC
AACGACGATC CTTGGTACGT GGTCGATAAA GATCTCAAAC GTAATGTCTT GGTGGTTGGC
CAAGGTGGGC ATCACCCGCG TTTGATGTCC AACGGCATGC TCGTCAATCA ATTGCATTGG
GTCGACCGCA AAGGTCCCGC CGAAGGCAGC CAGATTGTGG TGAAAACCCG TTACCGCCAA
CAGGATATCC CCTGCACCCT CACCTATCTT GATGACAATA CCCTCAAGGT GGTGTTTGAC
GAGCCTGTTG CCGCCGTGAC GCCTGGCCAA TCAGCGGTAT TCTACGATGG CGAAGTGTGC
CTAGGTGGCG GGATAATCGA TCAACTGATC CGAGGATAA
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| Protein sequence | MTSIEPTHTG KKVIVGMSGG VDSSVSAYLL MQQGYQVEGL FMKNWEEDDN DEYCAAAEDL
KDAQAVCDKL GIKLHTVNFA AEYWDNVFEY FLAEYKAGRT PNPDIMCNKE IKFKAFLDFA
DDILDADYIA MGHYVRRRDN ADGTTQMLRG VDNNKDQSYF LYTLSHEQVA RSLFPVGELE
KHEVREIAKK MGLITHDKKD STGICFIGER KFTEFLGNYL PAQPGNIETA EGEIIGKHQG
LMYQTLGQRK GLGIGGMKNS NDDPWYVVDK DLKRNVLVVG QGGHHPRLMS NGMLVNQLHW
VDRKGPAEGS QIVVKTRYRQ QDIPCTLTYL DDNTLKVVFD EPVAAVTPGQ SAVFYDGEVC
LGGGIIDQLI RG
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