Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1744 |
Symbol | |
ID | 4479577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2057531 |
End bp | 2058670 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639726327 |
Product | cupin 4 family protein |
Protein accession | YP_869383 |
Protein GI | 117920191 |
COG category | [S] Function unknown |
COG ID | [COG2850] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACAC TCAATCTCGA TATCGCCCAA TTCCTCAAGG AACACTGGCA ACAAAAACCT GTAGTCATCA AGGGGGCTTT CCCTGACTTT GAAGATCCGA TCAGCGCCGA TGAGCTTGCA GGCCTTGCCT GTGAAGAAGA AATCACCTCG CGCATTGTGG TCACTCAAAA AGACAACTGG GAAGTGATCC AAGGTCCGTT CGAGGATTAC GACAATTACG GTGAAACCCA CTGGCAATTA CTGGTGCAAG CCGTAAACCA CTGGTATCCG GACTCTCAGC CGTTAGTGGA AGCGTTTCGT TTTCTGCCCG ACTGGCGATT CGATGATTTG ATGGTGTCCT TCGCGACCCC GAGTGGCGGT GTCGGTCCAC ACGTTGATAA CTACGATGTG TTTATCATCC AAGGTGAAGG CGAGCGTCGC TGGACTGTGG GAGCTAATAC GCCGCAACAA CGCCGTGGCG GCAACCCGAA CTCGCCACTG GTGGAAGACT TCGAGCCAAT CATCGACGTG GTATTAGAAA AAGGCGACGT GCTATATATT CCGCCTGGCT ACCCACACTG CGGTGAAACC TTAACCTTAG CCTTAAGCTA TTCAATTGGT TACCGTGCGC CGAGCCAACA GGAGCTCGCC AGTGAAGTTG CCGATTACTT GCTCGACAAT AACTTAGGTC AGCAGCGTTT TACCTCGGCG ACTGAGCCTG CAAATCCTGG CGTGATCAGT CAAGATCATC AGCTCGGGAT CATGTCGCTC TTAAGTCAGC TCGCCCAAGA TCCAACAAGC TACCAAGTGG TGCTAGGTAA ACTGTTGAGT CAAAACCGTT TTGAACTGGA TATTTGCGAG GGTGAAGAAG CCTATAACGC CGACGATCTG CAGGATGCCT TCGAGCAAGG TGCCGGCGTT AATCGTATCG GTGGCTTAAA AGTGCTGCGC TTAGAAAACG ACACTCAATC ACGCTTATTC ATCAATGGCG AAATTTATGA GCTGCCCAAT ACGCCAGAAG CCGTGTTAAT CCAGTTAAGC GATCATGTCA GCTTTGATAG CGACAGCGCC ATGGCACTGT GTGAGCATGC TGAAGTGCAA GAACTACTGC TTAAGCTTAT CAATCAAGGC TTATATTATT TAAGTGACGA TGAAGCTTAA
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Protein sequence | MYTLNLDIAQ FLKEHWQQKP VVIKGAFPDF EDPISADELA GLACEEEITS RIVVTQKDNW EVIQGPFEDY DNYGETHWQL LVQAVNHWYP DSQPLVEAFR FLPDWRFDDL MVSFATPSGG VGPHVDNYDV FIIQGEGERR WTVGANTPQQ RRGGNPNSPL VEDFEPIIDV VLEKGDVLYI PPGYPHCGET LTLALSYSIG YRAPSQQELA SEVADYLLDN NLGQQRFTSA TEPANPGVIS QDHQLGIMSL LSQLAQDPTS YQVVLGKLLS QNRFELDICE GEEAYNADDL QDAFEQGAGV NRIGGLKVLR LENDTQSRLF INGEIYELPN TPEAVLIQLS DHVSFDSDSA MALCEHAEVQ ELLLKLINQG LYYLSDDEA
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