Gene Shewana3_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1744 
Symbol 
ID4479577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2057531 
End bp2058670 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content50% 
IMG OID639726327 
Productcupin 4 family protein 
Protein accessionYP_869383 
Protein GI117920191 
COG category[S] Function unknown 
COG ID[COG2850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACAC TCAATCTCGA TATCGCCCAA TTCCTCAAGG AACACTGGCA ACAAAAACCT 
GTAGTCATCA AGGGGGCTTT CCCTGACTTT GAAGATCCGA TCAGCGCCGA TGAGCTTGCA
GGCCTTGCCT GTGAAGAAGA AATCACCTCG CGCATTGTGG TCACTCAAAA AGACAACTGG
GAAGTGATCC AAGGTCCGTT CGAGGATTAC GACAATTACG GTGAAACCCA CTGGCAATTA
CTGGTGCAAG CCGTAAACCA CTGGTATCCG GACTCTCAGC CGTTAGTGGA AGCGTTTCGT
TTTCTGCCCG ACTGGCGATT CGATGATTTG ATGGTGTCCT TCGCGACCCC GAGTGGCGGT
GTCGGTCCAC ACGTTGATAA CTACGATGTG TTTATCATCC AAGGTGAAGG CGAGCGTCGC
TGGACTGTGG GAGCTAATAC GCCGCAACAA CGCCGTGGCG GCAACCCGAA CTCGCCACTG
GTGGAAGACT TCGAGCCAAT CATCGACGTG GTATTAGAAA AAGGCGACGT GCTATATATT
CCGCCTGGCT ACCCACACTG CGGTGAAACC TTAACCTTAG CCTTAAGCTA TTCAATTGGT
TACCGTGCGC CGAGCCAACA GGAGCTCGCC AGTGAAGTTG CCGATTACTT GCTCGACAAT
AACTTAGGTC AGCAGCGTTT TACCTCGGCG ACTGAGCCTG CAAATCCTGG CGTGATCAGT
CAAGATCATC AGCTCGGGAT CATGTCGCTC TTAAGTCAGC TCGCCCAAGA TCCAACAAGC
TACCAAGTGG TGCTAGGTAA ACTGTTGAGT CAAAACCGTT TTGAACTGGA TATTTGCGAG
GGTGAAGAAG CCTATAACGC CGACGATCTG CAGGATGCCT TCGAGCAAGG TGCCGGCGTT
AATCGTATCG GTGGCTTAAA AGTGCTGCGC TTAGAAAACG ACACTCAATC ACGCTTATTC
ATCAATGGCG AAATTTATGA GCTGCCCAAT ACGCCAGAAG CCGTGTTAAT CCAGTTAAGC
GATCATGTCA GCTTTGATAG CGACAGCGCC ATGGCACTGT GTGAGCATGC TGAAGTGCAA
GAACTACTGC TTAAGCTTAT CAATCAAGGC TTATATTATT TAAGTGACGA TGAAGCTTAA
 
Protein sequence
MYTLNLDIAQ FLKEHWQQKP VVIKGAFPDF EDPISADELA GLACEEEITS RIVVTQKDNW 
EVIQGPFEDY DNYGETHWQL LVQAVNHWYP DSQPLVEAFR FLPDWRFDDL MVSFATPSGG
VGPHVDNYDV FIIQGEGERR WTVGANTPQQ RRGGNPNSPL VEDFEPIIDV VLEKGDVLYI
PPGYPHCGET LTLALSYSIG YRAPSQQELA SEVADYLLDN NLGQQRFTSA TEPANPGVIS
QDHQLGIMSL LSQLAQDPTS YQVVLGKLLS QNRFELDICE GEEAYNADDL QDAFEQGAGV
NRIGGLKVLR LENDTQSRLF INGEIYELPN TPEAVLIQLS DHVSFDSDSA MALCEHAEVQ
ELLLKLINQG LYYLSDDEA