| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1718 |
|---|
| Symbol | |
|---|
| ID | 4479551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2021750 |
|---|
| End bp | 2022214 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639726301 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_869357 |
|---|
| Protein GI | 117920165 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0029382 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.239872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG AGCGTATGAC GCAAAAACTG GCGATTATTA TGCGAGGATT GCCGGGCAGC
GGTAAATCCC ATTGGGTCGA GCAGTTTGTT GCTAATCAGC CCTTAGAACA GGCGCTGCGC
GTCCGTCAAG GCGGCATTTT TTCGACCGAT AGTTTTTTCT ACGAAGGAGA GGAGTATCGA
TTCGATGCGA AAAAACTCTC CGAATACCAT CAACGTAATT TAACCGCGTT TATTCACGCG
CTCAGTAGCG CTCTGCCTAT CGTGATTTGT GACAACACTA ATCTTTGCCG CTGGGAATAC
ATGGCCTATG AGGCGGCAGC GAAAGCCTTA GGTTATCAAG TGCGTATCGT ACTGGTGGGC
GAGCCTTTGG ACCGCGCGCA TCAACAATTG TGCGCTGAGC GTAATCGTCA TGGTGTGCCG
CTAAATCAAA TACGGCGTAT GGCCGCGCAG TTTGAGGCAT TCTAG
|
|---|
| Protein sequence | MSSERMTQKL AIIMRGLPGS GKSHWVEQFV ANQPLEQALR VRQGGIFSTD SFFYEGEEYR
FDAKKLSEYH QRNLTAFIHA LSSALPIVIC DNTNLCRWEY MAYEAAAKAL GYQVRIVLVG
EPLDRAHQQL CAERNRHGVP LNQIRRMAAQ FEAF
|
|---|
| |