Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1712 |
Symbol | sucC |
ID | 4479545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2016832 |
End bp | 2017998 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726295 |
Product | succinyl-CoA synthetase subunit beta |
Protein accession | YP_869351 |
Protein GI | 117920159 |
COG category | [C] Energy production and conversion |
COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0807295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.149582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTGC ATGAGTATCA GGCAAAATCC CTATTTGCCG AATATGGTTT ACCAGTGTCA GAAGGTTTTG CATGTGATAC AGCCCAAGAA GCTGTAGAAG CGGCAGGCCG TATTGGCGGA AATTTATGGG TTGTTAAGTG TCAAGTACAC GCAGGCGGCC GCGGTAAAGC GGGTGGCGTT AAAGTCACTG GCGATAAAGA AGAAATCAGA GCCTTTGCCG AACACTGGTT AGGCAAAAAT CTGGTGACTT ATCAAACTGA TGAGAAAGGT CAGCCGGTTG CTAAAATTTT AGTAGAAAGC TGCACTGACA TCGCTAACGA ACTGTACTTA GGTGCAGTAG TTGACCGCGC TACCCGTCGC GTAGTGTTTA TGGCGTCAAC TGAAGGTGGT GTTGAGATTG AGAAAGTGGC CGAAGAAACG CCAGAACTCA TTCACAAAGC GATCATCGAT CCACTGACTG GTCCTCAACC ATACCAAGCA CGTGATCTTG GCTTCAAACT GGGCTTAAAC CCAACTCAAA TGAAGCAATT CACCAAGATC TTCATGGGTC TGGCGACTAT GTTCGTTGAT CACGATTTCG CTCTGCTGGA AATCAACCCA CTGGTTATCA CCACTGAAGG TAACCTGCAC TGCTTAGACG GTAAAATTGG TATCGATGGT AACGCACTGT TCCGTCAAGC AAAAATCAAA GCAATGCACG ATCCATCTCA AGATGACGCC CGTGAAGCTC ACGCTGCAAT GTTCGAACTG AACTATGTTG CGCTAGACGG AAACGTAGGT TGTATGGTGA ACGGTGCTGG CCTAGCGATG GGTACTATGG ACATCGTTAA CCTGCACGGC GGCAAGCCAG CTAACTTCCT CGACGTAGGT GGTGGCGCGA CTAAAGAACG TGTTGCTGAA GCATTCAAGA TCATTCTGTC TGACAGCAAT GTGAAAGCCG TTCTAGTTAA CATCTTCGGT GGTATCGTAC GTTGTGACAT GATCGCAGAA GGTATCATTG GCGCTGTTAA AGAAGTTGGC GTTAAAGTTC CAGTTGTAGT GCGTTTAGAA GGTACTAACG CTGAATTAGG CCGTGAAGTA TTAGCTAAAT CAGGTCTTGA TATCATTGCA GCTAACAGTC TGACTGATGC GGCTGAGCAA GTAGTTAAAG CTGCGGAGGG CAAATAA
|
Protein sequence | MNLHEYQAKS LFAEYGLPVS EGFACDTAQE AVEAAGRIGG NLWVVKCQVH AGGRGKAGGV KVTGDKEEIR AFAEHWLGKN LVTYQTDEKG QPVAKILVES CTDIANELYL GAVVDRATRR VVFMASTEGG VEIEKVAEET PELIHKAIID PLTGPQPYQA RDLGFKLGLN PTQMKQFTKI FMGLATMFVD HDFALLEINP LVITTEGNLH CLDGKIGIDG NALFRQAKIK AMHDPSQDDA REAHAAMFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE AFKIILSDSN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GTNAELGREV LAKSGLDIIA ANSLTDAAEQ VVKAAEGK
|
| |