| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1704 |
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| Symbol | |
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| ID | 4479537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2006161 |
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| End bp | 2007225 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726287 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_869343 |
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| Protein GI | 117920151 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGT CAACAATTGC TAAGTTCGCC CTACCCGTGC TGTTAGTGTC AATGTTAGCA
GCATGCGGCG AAGAGGAAGT GGCTAAAAAA GAAGAACAAT ATGCCATTCC CGTCGAAACC
ACTACCGTGA TGCAGGGTAA TGTGTCTTCG TTTTATAGCA CTACCGCCAC CCTCGAAGCC
CCACAGGAAG CTAACGTCGT GAGCCGCATC GCAGGCCTTA TCGAAGCCAT TAATGTCGAA
GAAGGCGACC GGGTGCAAAA AGGACAAATC CTCGCGGTTA TCGATGCCAA ACGCCAGCAA
TACGATCTCG ACCGCTCCGA AGCCGAAGTG AAAATCATCG AGCAAGAGTT AAACCGCTTG
AAGAAGATGA CCAATAAAGA GTTTATCAGT GCCGACTCCA TGGCAAAGCT CGAATACAAC
CTGCAAGCCG CCATTGCAAG ACGGGATCTT GCTGAATTAC AAGTTAAAGA AAGCCATGTG
GTTTCGCCCA TCGATGGTAT TGTTGCTAAA CGTTATGTCA AAGCGGGCAA CATGGCGCAG
GAATTTGGTG ACCTCTTCTA TATCGTCAAT CAAGACGAGC TGCACGGGAT TGTCCATTTA
CCCGAGCAAC AATTAACTAG CCTACGTTTA GGCCAAGAAG CCCAAGTCTT TAGCAATCAA
CAGAGCAAAA ATGCCATCCA CGCGAAAGTG CTGCGCATCA GCCCTGTGGT CGACCCACAG
AGCGGCACCT TTAAAGTCAC CTTGGCCGTG CCCAATCAAA ATGCGCATTT AAAAGCCGGG
ATGTTCACAC GGGTCGAATT GAAGTATGAC ACCCATGAGA ATGTGATCAC TGTGCCCTAC
AGTGCCCTGA TCAACCAAGA CAATAAGCAA GCCCTGTATG TGATTGACGG CAGCAATGCC
AACCGCCGCG AAGTCGAAAT CGGCTACCGC GAAGGTGACT CGGTGGAAGT CGTCTCCGGT
ATCAAACCCG GCGAGCAAGT CGTGACCCGT GGTCAGCAAA ATTTGAAAGA CCAATCCTTA
GTTGAAGTCA TTACCCCACT CGATTTGGCC TCAGCGAAGA ACTGA
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| Protein sequence | MEKSTIAKFA LPVLLVSMLA ACGEEEVAKK EEQYAIPVET TTVMQGNVSS FYSTTATLEA
PQEANVVSRI AGLIEAINVE EGDRVQKGQI LAVIDAKRQQ YDLDRSEAEV KIIEQELNRL
KKMTNKEFIS ADSMAKLEYN LQAAIARRDL AELQVKESHV VSPIDGIVAK RYVKAGNMAQ
EFGDLFYIVN QDELHGIVHL PEQQLTSLRL GQEAQVFSNQ QSKNAIHAKV LRISPVVDPQ
SGTFKVTLAV PNQNAHLKAG MFTRVELKYD THENVITVPY SALINQDNKQ ALYVIDGSNA
NRREVEIGYR EGDSVEVVSG IKPGEQVVTR GQQNLKDQSL VEVITPLDLA SAKN
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