Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1698 |
Symbol | |
ID | 4477208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1995884 |
End bp | 1996792 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726281 |
Product | AraC family transcriptional regulator |
Protein accession | YP_869337 |
Protein GI | 117920145 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGA TGCAAATGAT GAATGGTTTT TCTCAAGTGC TTGCCGACAA TGTGGCCAAA AGAACCCTTG GCGTCGAATG GGCATCATCT GAGGTCGAGG GGCTCGAGTT TTATCGGCAG AATGCACCCA CCTCCAACTC GGTTTGTATT GTCGAGCCAA GTATTGCGGT TGTGGTGCAA GGCGCGAAGA GTATGACCTT GGGGGAGCAG GTATTGATCT ACGATCCGAG TCGATTCTTA ATCACTTCGT TAGAACTACC CGCCACCATG CAAGTGTTAG AGGCCAGTAC AGAAAAACCT TACCTCGGTG TCGTGCTAAA ACTCGATTTG GCGGTGATGA GTGACTTAAT GTTGCAAACG CCCTTAGCGA GGCAAAAGGA TACGGTTACC GACCAAGGCA TGATTTTAGG CCATTCCACC CCAAGCTTGT TGAATGCTTT CAGCCGTTTA GTTGCCTTAC TCGATGAGCC TGAGTCGATT CCTGTGCTTG CGCCTCTGAT TAAAAGAGAG ATTTTTTGGC GAGTGCTTAT CAGTGAGCAG GGCGCGCGCT TAAGGCAAAT CGTGTCGGCG GGCAGCCATG GTTTACGCAT CGCGCATTCT ATCGAGTGGC TTAAAGTGAA TTTTGCCCAG CATTTTAGCA TCGATGATTT AGCCGATATG ACCCGAATGA GTAAATCGAC CTTTCACCAT CATTTTCGTC AATTGACCTC GATGAGTCCG CTGCAATATC AAAAACGGTT ACGCTTGATG GAGGCTCGCC GATTGATGTT AAGCGAGAGC ATAGATGCTG CCGCAGCCGC TTATCGTGTT GGTTATGAGA GTCCATCGCA ATTTTCCCGC GAATACTCGC GTCTGTTTGG CAACTCCCCC AAACGAGATG TCGATATCCA CTGGTTATCA TCGACCTGA
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Protein sequence | MSEMQMMNGF SQVLADNVAK RTLGVEWASS EVEGLEFYRQ NAPTSNSVCI VEPSIAVVVQ GAKSMTLGEQ VLIYDPSRFL ITSLELPATM QVLEASTEKP YLGVVLKLDL AVMSDLMLQT PLARQKDTVT DQGMILGHST PSLLNAFSRL VALLDEPESI PVLAPLIKRE IFWRVLISEQ GARLRQIVSA GSHGLRIAHS IEWLKVNFAQ HFSIDDLADM TRMSKSTFHH HFRQLTSMSP LQYQKRLRLM EARRLMLSES IDAAAAAYRV GYESPSQFSR EYSRLFGNSP KRDVDIHWLS ST
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