Gene Shewana3_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1698 
Symbol 
ID4477208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1995884 
End bp1996792 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content49% 
IMG OID639726281 
ProductAraC family transcriptional regulator 
Protein accessionYP_869337 
Protein GI117920145 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA TGCAAATGAT GAATGGTTTT TCTCAAGTGC TTGCCGACAA TGTGGCCAAA 
AGAACCCTTG GCGTCGAATG GGCATCATCT GAGGTCGAGG GGCTCGAGTT TTATCGGCAG
AATGCACCCA CCTCCAACTC GGTTTGTATT GTCGAGCCAA GTATTGCGGT TGTGGTGCAA
GGCGCGAAGA GTATGACCTT GGGGGAGCAG GTATTGATCT ACGATCCGAG TCGATTCTTA
ATCACTTCGT TAGAACTACC CGCCACCATG CAAGTGTTAG AGGCCAGTAC AGAAAAACCT
TACCTCGGTG TCGTGCTAAA ACTCGATTTG GCGGTGATGA GTGACTTAAT GTTGCAAACG
CCCTTAGCGA GGCAAAAGGA TACGGTTACC GACCAAGGCA TGATTTTAGG CCATTCCACC
CCAAGCTTGT TGAATGCTTT CAGCCGTTTA GTTGCCTTAC TCGATGAGCC TGAGTCGATT
CCTGTGCTTG CGCCTCTGAT TAAAAGAGAG ATTTTTTGGC GAGTGCTTAT CAGTGAGCAG
GGCGCGCGCT TAAGGCAAAT CGTGTCGGCG GGCAGCCATG GTTTACGCAT CGCGCATTCT
ATCGAGTGGC TTAAAGTGAA TTTTGCCCAG CATTTTAGCA TCGATGATTT AGCCGATATG
ACCCGAATGA GTAAATCGAC CTTTCACCAT CATTTTCGTC AATTGACCTC GATGAGTCCG
CTGCAATATC AAAAACGGTT ACGCTTGATG GAGGCTCGCC GATTGATGTT AAGCGAGAGC
ATAGATGCTG CCGCAGCCGC TTATCGTGTT GGTTATGAGA GTCCATCGCA ATTTTCCCGC
GAATACTCGC GTCTGTTTGG CAACTCCCCC AAACGAGATG TCGATATCCA CTGGTTATCA
TCGACCTGA
 
Protein sequence
MSEMQMMNGF SQVLADNVAK RTLGVEWASS EVEGLEFYRQ NAPTSNSVCI VEPSIAVVVQ 
GAKSMTLGEQ VLIYDPSRFL ITSLELPATM QVLEASTEKP YLGVVLKLDL AVMSDLMLQT
PLARQKDTVT DQGMILGHST PSLLNAFSRL VALLDEPESI PVLAPLIKRE IFWRVLISEQ
GARLRQIVSA GSHGLRIAHS IEWLKVNFAQ HFSIDDLADM TRMSKSTFHH HFRQLTSMSP
LQYQKRLRLM EARRLMLSES IDAAAAAYRV GYESPSQFSR EYSRLFGNSP KRDVDIHWLS
ST