| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1690 |
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| Symbol | |
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| ID | 4477200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1985098 |
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| End bp | 1989000 |
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| Gene Length | 3903 bp |
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| Protein Length | 1300 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726273 |
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| Product | protease domain-containing protein |
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| Protein accession | YP_869329 |
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| Protein GI | 117920137 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.983324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA AAATTGCACT AGCGGTGTCT ATGGCATTGC TGTCGGCTGC GGCAAATGCG
CAAACCGTAT TATCGCCAAC TGGTGAAACG TTACAGTTAG ATATTCCAGC GGAATTATCA
AATGATTCGA CCCGAGGTCA ATTAACTGCG GTTAACAACC AAGATGTAAA ATTTATTCCT
GAGCCAGATT TAGCCGAGGG AGAATATACC TATATCGTGA GATTACGTGA CAGCGCGGTC
GCGAATTATC AGGGGGATAT TCCAGGCTTT AAGGCCACCA GCCCACAACA TGTACAGCCG
ACCTCGCAGG CAAAAAGCAC AGGTAAGACA GGTAATGTCA AACTTAATGC CGCCGCACCT
GAAGTCAAAA ATTACGTCAG TTTCCTCAAG GTCAAGCAAG AGCGCTTTTT AACAAGTGCC
AGCGCGGCCA TTGGTAGCCG TCTTGAGCCG CTGACCACTT ACCAATACGC CATCAACGGT
GTTGCCGTGC GTATGACTCA GGCGCAAGCC ATCAAACTGG CCGAATTACC TGAAGTGGTT
TATATCGAGC GCGAGAAAGT CGAACAGCTT GAAACCGATG TGAGTCAGGC ATTGATCGGC
TCCCCAAAGG TGTGGGACGG TAGTGCAACC GGCACTAAAG CTATGGGGGA AGGCGTGATT
GTGGCGATTA TCGACTCAGG GATTAACTCT GATCACGCTT CTTTCGCCGA TGTCGGTGAA
GATGGTTACG ATCACACCAA CCCCTTAGGC CAAGGGATTT ATGTTGGTGA CTGTAAAACC
GATTTTGCCA GCATGTGTAA TGACAAGCTG ATTGGTGTGC GCAGCTACCC TGAAATCACC
GATGTCTATG ATGATGAAAA GGTTTTCGGC GCGACGCCGC CCGCTAAAAA CGGCGAAGAT
TACGGTGGTC ATGGCTCCCA CGTTGCCAGC ACCGCGGCAG GAAACATCCT GCTCAATGTT
CCTTATGTTG AGGGAGAAGT GGGTAAACTC GAAGGTTCGG GGATCCCGAC TGGCTTAACG
TTTGCGCAAA TGTCCGGCGT GGCTCCCCAC GCAAACATTA TTGCCTATCA AGTCTGTAAG
CCTGGCGATC AAGAAGATAC TTACAATGGC TGTTCAACTG CGCCGATTTT AAAAGCGATT
GATGATGCGA TTAAAGATGG CGTGGACGTG ATCAACTTCT CCATCAGTGG CGGCGGCAAT
CCATGGAACA GCGCGACAGA GCAAGGCTTC TTAGCGGTGC GTAATGCGGG TATTTTTGCT
GCGGTTGCGG CGGGTAACAC CCGGGCAAAC ATCGCGCAGG TACCTTATTC ATCGTCTAAA
AACGCACCTT GGTATACCTC GGTGGCTAAC TCGACTCACA ATCGTGAAGT GGTACGTGAG
CTGGAATTTA ATGGCAAGAC CTTTGAATTC ACCCCAGGCT CTGGCCCTGT GCAAACCGAC
GTTGTGAAAG GACTGCCCGT ATTTGCAGGC GCAGTTGATG CGACCAATGT GGAAGGCTGT
AAAGTATTCC CTGCCGATGC CTTTAAAGAC AAGATTGCCG TTATCAAACG CGGTTCATGT
GATTTCGCCA CTAAAGTATC GGGTGCATTA ACGGCGGGCG CTAAAGCGGT TATCGTGTAC
AACCGTGATG GTGAAGGCAA TGCGCGCTTA ACCATGTCGG CATTGGAGAA GTTAAATGTC
CCTGCGGTAT TTATTGGTAA TACCGATGGC GTAGCCTTAC TCGAGGCCAT GGCCGCCAAT
CCAGCAGTGG AGCTAACCTT AACCCCGACA CCGCAAGCGA TTAGCCGTGA GGCCGATGTG
TTATCTGCCA GTTCACTGAT TGGCCCAAAT GCGACCAATG ATGTGATTGT GCCTTCGGTG
GCTGCTCCGG GTACGGATAT TTACGCTGCT TATGCTGATC AACAATTTGG CCATGATAAA
TCGGGCACAA ATCCTGCCGA CTTTACCTTA ATGTCGGGCA CTTCAATGGC AAGCCCGCAT
GTTGCGGGTG CGGGCTCGCT GTTAAAGTCA CTGCACAAGG ATTGGACACC GGACAATATT
CGCTCCGCAT TAATGTTGAC CGCTACGACT GCGCAGGCGA TGAAAAAAGC CGATGCTAAA
ACCGTTGCCG ATCCGTTCGA CGTGGGCGCT GGCCGTATAC GTGTGGATTT AGCGGCAAAA
ACGGGTTTAG TGATGGACGA AAGTGCCCTG AACTATGAAA TTGCCAACCC AGTCGTGAAC
GGCGACCCAC GTAAGTTAAA CGTGCCCAGC ATGGCCGATT CTCGCTGCGT GAATACCTGT
ACTTGGACCC GTACCGTAAC AGCAACCCAA GATGGTAGTT GGACGGCGAA GGGCCAAGCG
GTGACCGATA AGTTAGCATT AACCGTGTCA CCTGAAAGCT TTACCCTGAA AAAAGGCGCG
AGCCAAACCA TTACCGTGAC CGCCGATGTG ACACAAGTGG GCGCAGATTG GGGCTTTGGC
AACTTAGTGC TCGAGTCGGC AAGCTTCCCA ACGGCGACTA TGCCGATTGC CGCTAAGATT
GGTAAGCGTA ACCTGCCCAA TTTAGTGAAC ATTGAAGCGA CCCGTAATGC GGATGAAATC
AATCTTGAAG GCTTAAAGGC GGTGGATTTT GCCAGCGTGG GCGCCGAAGT GACGGGCCTA
AAGCTGAGCC AAACCATTGA GTCAAGTGTG AAGCAAGACT CAAACAATGC CTCATACACT
GATGATCTCG CCGATGGCGT CAAAGTGTTT AAGTTTGACG TGAATGAGAA TGCACTGTTC
TTCCGTACTT CCATTAGCTA CACCACATCC CCTGATCTCG ATATGTACGT GCTACTCGAT
AAAAACGATG GCAGCAAACT TGTGCGAGTG GGTTCATCGG CTAAAGACGG TTCAGAGGAA
AGTGTCTTAC TCAATAATCC GGTGAAGGGC AGTTACTATG TGATTGTGCA AAACTACAGC
GCCTCATCCG CGACGGCCGA TGACGTGTTT GGTTTGAAAC AATTGACCTT CTACAACAAT
GAAACCGCAG CGGATAACCT AACGGCGACG CTTTCTGGTG ATACTAAAGA CTTCGACGTC
AAGCTGGCGT GGAAGGATGC GCTCAAAGTG GGTGACGATG GTTTAGCCAT GCTGACCCTC
ACCACGGGTG ATGACAAAGT GGCGCCAGTG AAGTTACCCG TTATCTTTGA ACGTGTCGGT
GATGATGTGC TATCGCCTCT GGGCAATGCG CTAAGTGGTC AGTTGACACC GGGCGTTGCT
AAGGTGATGA AAACCCGCAT CGAAGCCAAC AGAACCCAAG AAACGCGTGT GTATAACTTA
GAAGCTATGC TGCCTGAAGG CCATGAAGTG GCTAACATCA GCCATGACGG TAAGCAAGAT
GGTAATAAGA TCACTTGGAC GGTCGAGATG CCATCGGGCG CTGACGCGAA AGACATCAGC
TTTGAGTTGG TTCCACGTAA GGCGAGTGTC GATAATCAGT TAAGCCTGAC AAACAAGGTC
AACAATGCCT CGTCAGAAAC CCTGACTCAA AGTTACCAGT TTGATGTGTC TGAAGTGGCG
CCAGTTGCTA AGGTTGAAGC GCCAACCACA GTCCAAGAAG GTAAGCCGCT GTTTATCGAT
GCGAGCAAAT CATCGGATGC GAACAATGAT CCGCTGACCT ACAAGTGGAC GCAGTTAGGT
GGCACCAGCT TTAATTTTGA CCCCACGGCG GCCAAATTAA ACTTAGTGGC GCCAAGTGTG
AATGGTGCGG CGCAAACCGT GTCATTCCAA CTGACGGTAT CCGATAACCA CGGCAACAGC
GATTCGAGCT TAGTTTCGGT ATCGATTACC GATACTCCGC CGAAGAAGGA TGACGGTGGT
GCTTTAGGCT GGTTAAGTTT ATTACTGCTG CCATTTGCTT TTGGTCGCCG TAAACAGCGT
TAA
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| Protein sequence | MKTKIALAVS MALLSAAANA QTVLSPTGET LQLDIPAELS NDSTRGQLTA VNNQDVKFIP
EPDLAEGEYT YIVRLRDSAV ANYQGDIPGF KATSPQHVQP TSQAKSTGKT GNVKLNAAAP
EVKNYVSFLK VKQERFLTSA SAAIGSRLEP LTTYQYAING VAVRMTQAQA IKLAELPEVV
YIEREKVEQL ETDVSQALIG SPKVWDGSAT GTKAMGEGVI VAIIDSGINS DHASFADVGE
DGYDHTNPLG QGIYVGDCKT DFASMCNDKL IGVRSYPEIT DVYDDEKVFG ATPPAKNGED
YGGHGSHVAS TAAGNILLNV PYVEGEVGKL EGSGIPTGLT FAQMSGVAPH ANIIAYQVCK
PGDQEDTYNG CSTAPILKAI DDAIKDGVDV INFSISGGGN PWNSATEQGF LAVRNAGIFA
AVAAGNTRAN IAQVPYSSSK NAPWYTSVAN STHNREVVRE LEFNGKTFEF TPGSGPVQTD
VVKGLPVFAG AVDATNVEGC KVFPADAFKD KIAVIKRGSC DFATKVSGAL TAGAKAVIVY
NRDGEGNARL TMSALEKLNV PAVFIGNTDG VALLEAMAAN PAVELTLTPT PQAISREADV
LSASSLIGPN ATNDVIVPSV AAPGTDIYAA YADQQFGHDK SGTNPADFTL MSGTSMASPH
VAGAGSLLKS LHKDWTPDNI RSALMLTATT AQAMKKADAK TVADPFDVGA GRIRVDLAAK
TGLVMDESAL NYEIANPVVN GDPRKLNVPS MADSRCVNTC TWTRTVTATQ DGSWTAKGQA
VTDKLALTVS PESFTLKKGA SQTITVTADV TQVGADWGFG NLVLESASFP TATMPIAAKI
GKRNLPNLVN IEATRNADEI NLEGLKAVDF ASVGAEVTGL KLSQTIESSV KQDSNNASYT
DDLADGVKVF KFDVNENALF FRTSISYTTS PDLDMYVLLD KNDGSKLVRV GSSAKDGSEE
SVLLNNPVKG SYYVIVQNYS ASSATADDVF GLKQLTFYNN ETAADNLTAT LSGDTKDFDV
KLAWKDALKV GDDGLAMLTL TTGDDKVAPV KLPVIFERVG DDVLSPLGNA LSGQLTPGVA
KVMKTRIEAN RTQETRVYNL EAMLPEGHEV ANISHDGKQD GNKITWTVEM PSGADAKDIS
FELVPRKASV DNQLSLTNKV NNASSETLTQ SYQFDVSEVA PVAKVEAPTT VQEGKPLFID
ASKSSDANND PLTYKWTQLG GTSFNFDPTA AKLNLVAPSV NGAAQTVSFQ LTVSDNHGNS
DSSLVSVSIT DTPPKKDDGG ALGWLSLLLL PFAFGRRKQR
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